Protein–RNA interactions for Protein: P08865

RPSA, 40S ribosomal protein SA, humanhuman

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP08865 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RPSAP08865 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.33■□□□□ 0.52
RPSAP08865 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPSAP08865 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPSAP08865 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
RPSAP08865 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RPSAP08865 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.32■□□□□ 0.52
RPSAP08865 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPSAP08865 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.32■□□□□ 0.52
RPSAP08865 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPSAP08865 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPSAP08865 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPSAP08865 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
RPSAP08865 AL118508.1-201ENST00000613502 2345 ntBASIC18.32■□□□□ 0.52
RPSAP08865 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPSAP08865 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPSAP08865 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.32■□□□□ 0.52
RPSAP08865 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.32■□□□□ 0.52
RPSAP08865 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RPSAP08865 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.32■□□□□ 0.52
RPSAP08865 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.32■□□□□ 0.52
RPSAP08865 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPSAP08865 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPSAP08865 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPSAP08865 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPSAP08865 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.31■□□□□ 0.52
RPSAP08865 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPSAP08865 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.31■□□□□ 0.52
RPSAP08865 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPSAP08865 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPSAP08865 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPSAP08865 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RPSAP08865 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPSAP08865 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPSAP08865 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPSAP08865 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPSAP08865 UBALD1-205ENST00000590891 2641 ntBASIC18.31■□□□□ 0.52
RPSAP08865 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPSAP08865 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RPSAP08865 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPSAP08865 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.31■□□□□ 0.52
RPSAP08865 BX842568.3-201ENST00000418104 571 ntBASIC18.31■□□□□ 0.52
RPSAP08865 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RPSAP08865 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPSAP08865 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPSAP08865 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
RPSAP08865 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.31■□□□□ 0.52
RPSAP08865 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPSAP08865 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPSAP08865 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPSAP08865 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPSAP08865 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RPSAP08865 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.31■□□□□ 0.52
RPSAP08865 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPSAP08865 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.3■□□□□ 0.52
RPSAP08865 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RPSAP08865 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPSAP08865 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPSAP08865 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPSAP08865 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RPSAP08865 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RPSAP08865 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RPSAP08865 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPSAP08865 AC108860.2-201ENST00000562760 2183 ntBASIC18.3■□□□□ 0.52
RPSAP08865 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPSAP08865 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPSAP08865 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPSAP08865 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPSAP08865 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RPSAP08865 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPSAP08865 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.3■□□□□ 0.52
RPSAP08865 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.3■□□□□ 0.52
RPSAP08865 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPSAP08865 AC022211.2-201ENST00000585075 2527 ntBASIC18.3■□□□□ 0.52
RPSAP08865 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPSAP08865 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPSAP08865 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPSAP08865 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RPSAP08865 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.29■□□□□ 0.52
RPSAP08865 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPSAP08865 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPSAP08865 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.29■□□□□ 0.52
RPSAP08865 AL356309.3-201ENST00000624132 1934 ntBASIC18.29■□□□□ 0.52
RPSAP08865 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.29■□□□□ 0.52
RPSAP08865 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPSAP08865 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPSAP08865 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPSAP08865 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPSAP08865 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
RPSAP08865 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPSAP08865 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.29■□□□□ 0.52
RPSAP08865 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPSAP08865 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RPSAP08865 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPSAP08865 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPSAP08865 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.29■□□□□ 0.52
RPSAP08865 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RPSAP08865 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPSAP08865 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPSAP08865 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms