Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-ND1P03886 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MT-ND1P03886 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-ND1P03886 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MT-ND1P03886 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MT-ND1P03886 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
MT-ND1P03886 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
MT-ND1P03886 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.93■□□□□ 0.46
MT-ND1P03886 GPX1P1-201ENST00000388829 606 ntBASIC17.93■□□□□ 0.46
MT-ND1P03886 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.93■□□□□ 0.46
MT-ND1P03886 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MT-ND1P03886 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-ND1P03886 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MT-ND1P03886 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-ND1P03886 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-ND1P03886 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.93■□□□□ 0.46
MT-ND1P03886 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MT-ND1P03886 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MT-ND1P03886 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-ND1P03886 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.93■□□□□ 0.46
MT-ND1P03886 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
MT-ND1P03886 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-ND1P03886 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.93■□□□□ 0.46
MT-ND1P03886 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-ND1P03886 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-ND1P03886 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.93■□□□□ 0.46
MT-ND1P03886 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
MT-ND1P03886 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.92■□□□□ 0.46
MT-ND1P03886 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
MT-ND1P03886 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.92■□□□□ 0.46
MT-ND1P03886 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.92■□□□□ 0.46
MT-ND1P03886 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
MT-ND1P03886 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
MT-ND1P03886 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.92■□□□□ 0.46
MT-ND1P03886 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.92■□□□□ 0.46
MT-ND1P03886 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.92■□□□□ 0.46
MT-ND1P03886 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
MT-ND1P03886 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.92■□□□□ 0.46
MT-ND1P03886 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.92■□□□□ 0.46
MT-ND1P03886 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.92■□□□□ 0.46
MT-ND1P03886 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
MT-ND1P03886 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.92■□□□□ 0.46
MT-ND1P03886 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
MT-ND1P03886 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
MT-ND1P03886 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.92■□□□□ 0.46
MT-ND1P03886 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MT-ND1P03886 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.92■□□□□ 0.46
MT-ND1P03886 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
MT-ND1P03886 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.91■□□□□ 0.46
MT-ND1P03886 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
MT-ND1P03886 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.91■□□□□ 0.46
MT-ND1P03886 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND1P03886 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
MT-ND1P03886 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND1P03886 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.91■□□□□ 0.46
MT-ND1P03886 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND1P03886 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND1P03886 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND1P03886 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND1P03886 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.91■□□□□ 0.46
MT-ND1P03886 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.91■□□□□ 0.46
MT-ND1P03886 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.91■□□□□ 0.46
MT-ND1P03886 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.91■□□□□ 0.46
MT-ND1P03886 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND1P03886 MIR663A-201ENST00000385250 93 ntBASIC17.91■□□□□ 0.46
MT-ND1P03886 BX276092.2-201ENST00000417668 665 ntBASIC17.91■□□□□ 0.46
MT-ND1P03886 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.91■□□□□ 0.46
MT-ND1P03886 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.91■□□□□ 0.46
MT-ND1P03886 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
MT-ND1P03886 RAP2CP1-201ENST00000605103 478 ntBASIC17.91■□□□□ 0.46
MT-ND1P03886 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.91■□□□□ 0.46
MT-ND1P03886 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND1P03886 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND1P03886 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND1P03886 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
MT-ND1P03886 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
MT-ND1P03886 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
MT-ND1P03886 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
MT-ND1P03886 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND1P03886 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MT-ND1P03886 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.91■□□□□ 0.46
MT-ND1P03886 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.91■□□□□ 0.46
MT-ND1P03886 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms