Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AL645929.1-201ENST00000420084 975 ntBASIC16.95■□□□□ 0.3
CLDN1O95832 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CLDN1O95832 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.95■□□□□ 0.3
CLDN1O95832 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN1O95832 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.95■□□□□ 0.3
CLDN1O95832 MIR3180-1-201ENST00000580374 94 ntBASIC16.95■□□□□ 0.3
CLDN1O95832 MIR3180-3-201ENST00000584616 94 ntBASIC16.95■□□□□ 0.3
CLDN1O95832 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CLDN1O95832 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CLDN1O95832 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN1O95832 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CLDN1O95832 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.95■□□□□ 0.3
CLDN1O95832 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN1O95832 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN1O95832 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN1O95832 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CLDN1O95832 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN1O95832 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN1O95832 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN1O95832 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.95■□□□□ 0.3
CLDN1O95832 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
CLDN1O95832 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CLDN1O95832 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CLDN1O95832 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN1O95832 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN1O95832 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN1O95832 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN1O95832 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CLDN1O95832 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN1O95832 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN1O95832 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN1O95832 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN1O95832 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN1O95832 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN1O95832 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLDN1O95832 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN1O95832 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN1O95832 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN1O95832 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN1O95832 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN1O95832 TSSC2-201ENST00000450217 709 ntBASIC16.94■□□□□ 0.3
CLDN1O95832 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN1O95832 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CLDN1O95832 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.94■□□□□ 0.3
CLDN1O95832 AC104692.2-201ENST00000603054 253 ntBASIC16.94■□□□□ 0.3
CLDN1O95832 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN1O95832 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN1O95832 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN1O95832 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CLDN1O95832 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN1O95832 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN1O95832 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLDN1O95832 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN1O95832 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CLDN1O95832 HCG11-201ENST00000411553 5696 ntBASIC16.94■□□□□ 0.3
CLDN1O95832 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN1O95832 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN1O95832 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CLDN1O95832 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
CLDN1O95832 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN1O95832 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN1O95832 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN1O95832 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CLDN1O95832 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN1O95832 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN1O95832 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDN1O95832 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN1O95832 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN1O95832 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CLDN1O95832 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN1O95832 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLDN1O95832 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDN1O95832 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN1O95832 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.93■□□□□ 0.3
CLDN1O95832 NEK4P2-201ENST00000580004 1012 ntBASIC16.93■□□□□ 0.3
CLDN1O95832 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CLDN1O95832 AC139530.3-201ENST00000620344 690 ntBASIC16.93■□□□□ 0.3
CLDN1O95832 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDN1O95832 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN1O95832 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN1O95832 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN1O95832 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN1O95832 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN1O95832 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CLDN1O95832 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN1O95832 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN1O95832 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN1O95832 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN1O95832 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLDN1O95832 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN1O95832 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN1O95832 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN1O95832 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CLDN1O95832 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN1O95832 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CLDN1O95832 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
CLDN1O95832 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN1O95832 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN1O95832 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN1O95832 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms