Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 KRT8P3-201ENST00000519669 1449 ntBASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.04■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 AC008622.2-201ENST00000617006 1229 ntBASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 CR769767.2-201ENST00000622735 460 ntBASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 TEX21P-204ENST00000641479 1693 ntBASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.02■□□□□ 0.64
C1QTNF3-AMACRE9PGA6 MCCD1P1-208ENST00000445732 328 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms