Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 MIR3180-1-201ENST00000580374 94 ntBASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 MIR3180-3-201ENST00000584616 94 ntBASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 AC011498.5-201ENST00000592027 486 ntBASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 AC016734.2-201ENST00000624325 1377 ntBASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 LINC01465-201ENST00000408887 1940 ntBASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
TRABD2BA6NFA1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRABD2BA6NFA1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 KRT8P41-201ENST00000533985 1514 ntBASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 NUS1P1-201ENST00000446295 882 ntBASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 EMBP1-201ENST00000458200 901 ntBASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 AC092597.1-201ENST00000487352 616 ntBASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 IFNL4P1-201ENST00000607083 540 ntBASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 AC007225.1-201ENST00000566331 1836 ntBASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRABD2BA6NFA1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 BX119927.1-201ENST00000636596 1552 ntBASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.22■□□□□ 0.51
TRABD2BA6NFA1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms