Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 AC106820.2-201ENST00000563775 3264 ntBASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 ANO7L1-203ENST00000602586 1720 ntBASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MEIS3P1A6NDR6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 TFP1-202ENST00000475455 1573 ntBASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.3■□□□□ 0.2
MEIS3P1A6NDR6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 AC104417.2-201ENST00000562989 1793 ntBASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
MEIS3P1A6NDR6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MEIS3P1A6NDR6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms