Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV5A0A0B4J249 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV5A0A0B4J249 BCL2-203ENST00000589955 5011 ntBASIC14.77□□□□□ -0.04
TRAV5A0A0B4J249 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV5A0A0B4J249 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV5A0A0B4J249 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV5A0A0B4J249 AP006587.1-201ENST00000534129 1502 ntBASIC14.77□□□□□ -0.04
TRAV5A0A0B4J249 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV5A0A0B4J249 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV5A0A0B4J249 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.77□□□□□ -0.04
TRAV5A0A0B4J249 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV5A0A0B4J249 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV5A0A0B4J249 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV5A0A0B4J249 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRAV5A0A0B4J249 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TRAV5A0A0B4J249 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV5A0A0B4J249 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TRAV5A0A0B4J249 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 AC105036.2-201ENST00000569468 176 ntBASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 AC068880.1-201ENST00000507289 2297 ntBASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV5A0A0B4J249 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 AC073210.2-201ENST00000430369 194 ntBASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 AC133552.2-202ENST00000575694 574 ntBASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 NOC2LP2-201ENST00000407594 1944 ntBASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV5A0A0B4J249 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms