Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 FST-202ENST00000396947 2538 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 ANO7L1-203ENST00000602586 1720 ntBASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRAV13-2A0A0B4J235 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 CD44-222ENST00000526025 1052 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRAV13-2A0A0B4J235 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 ESPNP-201ENST00000270691 2015 ntBASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 MPST-208ENST00000628507 698 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 CD276-201ENST00000318424 2738 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 TSPY26P-201ENST00000476365 1326 ntBASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
TRAV13-2A0A0B4J235 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms