Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF346Q9UL40 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
ZNF346Q9UL40 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.13■□□□□ 0.33
ZNF346Q9UL40 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
ZNF346Q9UL40 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
ZNF346Q9UL40 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.13■□□□□ 0.33
ZNF346Q9UL40 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF346Q9UL40 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF346Q9UL40 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF346Q9UL40 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.13■□□□□ 0.33
ZNF346Q9UL40 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 AC020763.4-201ENST00000623414 4170 ntBASIC17.12■□□□□ 0.33
ZNF346Q9UL40 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 AC073648.6-201ENST00000641589 218 ntBASIC17.12■□□□□ 0.33
ZNF346Q9UL40 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF346Q9UL40 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 KRT16P5-201ENST00000455284 522 ntBASIC17.11■□□□□ 0.33
ZNF346Q9UL40 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 RN7SL471P-201ENST00000580476 299 ntBASIC17.11■□□□□ 0.33
ZNF346Q9UL40 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 AL138781.2-201ENST00000617896 1843 ntBASIC17.11■□□□□ 0.33
ZNF346Q9UL40 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF346Q9UL40 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF346Q9UL40 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF346Q9UL40 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF346Q9UL40 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF346Q9UL40 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF346Q9UL40 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF346Q9UL40 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF346Q9UL40 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF346Q9UL40 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF346Q9UL40 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF346Q9UL40 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF346Q9UL40 PRORSD1P-201ENST00000295112 541 ntBASIC17.1■□□□□ 0.33
ZNF346Q9UL40 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.1■□□□□ 0.33
ZNF346Q9UL40 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms