Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 AL049637.2-201ENST00000641778 930 ntBASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 AC124283.5-201ENST00000624661 1809 ntBASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
RABGEF1Q9UJ41 SDHAP1-207ENST00000440850 2000 ntBASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 AC104417.2-201ENST00000562989 1793 ntBASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RABGEF1Q9UJ41 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RABGEF1Q9UJ41 AC093525.10-201ENST00000625130 1569 ntBASIC19.52■□□□□ 0.71
RABGEF1Q9UJ41 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RABGEF1Q9UJ41 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RABGEF1Q9UJ41 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RABGEF1Q9UJ41 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
RABGEF1Q9UJ41 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RABGEF1Q9UJ41 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.52■□□□□ 0.71
RABGEF1Q9UJ41 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RABGEF1Q9UJ41 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RABGEF1Q9UJ41 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.52■□□□□ 0.71
RABGEF1Q9UJ41 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.52■□□□□ 0.71
RABGEF1Q9UJ41 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RABGEF1Q9UJ41 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 REXO1L12P-201ENST00000622156 912 ntBASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 AC005082.1-201ENST00000413042 2259 ntBASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RABGEF1Q9UJ41 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 AC211429.1-201ENST00000415277 523 ntBASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 TSPY15P-201ENST00000457163 923 ntBASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 AC113410.3-201ENST00000623366 203 ntBASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RABGEF1Q9UJ41 WIZP1-201ENST00000531444 2299 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms