Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCDNQ9UBB6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.87■□□□□ 0.61
NCDNQ9UBB6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.87■□□□□ 0.61
NCDNQ9UBB6 DRAXINP1-201ENST00000437611 948 ntBASIC18.87■□□□□ 0.61
NCDNQ9UBB6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.87■□□□□ 0.61
NCDNQ9UBB6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NCDNQ9UBB6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NCDNQ9UBB6 TOB2P1-201ENST00000469761 992 ntBASIC18.87■□□□□ 0.61
NCDNQ9UBB6 AC104819.1-201ENST00000504587 486 ntBASIC18.87■□□□□ 0.61
NCDNQ9UBB6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.87■□□□□ 0.61
NCDNQ9UBB6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.87■□□□□ 0.61
NCDNQ9UBB6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.87■□□□□ 0.61
NCDNQ9UBB6 AC138894.3-201ENST00000603787 634 ntBASIC18.87■□□□□ 0.61
NCDNQ9UBB6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NCDNQ9UBB6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.87■□□□□ 0.61
NCDNQ9UBB6 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.87■□□□□ 0.61
NCDNQ9UBB6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NCDNQ9UBB6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 MIR574-201ENST00000385209 96 ntBASIC18.86■□□□□ 0.61
NCDNQ9UBB6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NCDNQ9UBB6 AL157384.1-201ENST00000445995 2473 ntBASIC18.85■□□□□ 0.61
NCDNQ9UBB6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NCDNQ9UBB6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 KRT16P4-201ENST00000453883 522 ntBASIC18.84■□□□□ 0.61
NCDNQ9UBB6 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 MIR4674-201ENST00000582457 87 ntBASIC18.84■□□□□ 0.61
NCDNQ9UBB6 AC024243.1-201ENST00000609234 778 ntBASIC18.84■□□□□ 0.61
NCDNQ9UBB6 AL353801.3-201ENST00000609898 542 ntBASIC18.84■□□□□ 0.61
NCDNQ9UBB6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NCDNQ9UBB6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NCDNQ9UBB6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NCDNQ9UBB6 AL049796.1-201ENST00000565336 1766 ntBASIC18.83■□□□□ 0.61
NCDNQ9UBB6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.83■□□□□ 0.61
NCDNQ9UBB6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NCDNQ9UBB6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NCDNQ9UBB6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NCDNQ9UBB6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NCDNQ9UBB6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NCDNQ9UBB6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 229.1 ms