Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 SPDYE13P-201ENST00000445314 798 ntBASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 CKBP1-201ENST00000565489 1086 ntBASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.34■■□□□ 1.01
PDLIM7Q9NR12 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDLIM7Q9NR12 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PDLIM7Q9NR12 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.33■■□□□ 1.01
PDLIM7Q9NR12 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDLIM7Q9NR12 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDLIM7Q9NR12 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDLIM7Q9NR12 SPDYE15P-201ENST00000424157 909 ntBASIC21.33■■□□□ 1.01
PDLIM7Q9NR12 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.33■■□□□ 1.01
PDLIM7Q9NR12 GCSHP2-201ENST00000560971 527 ntBASIC21.33■■□□□ 1.01
PDLIM7Q9NR12 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
PDLIM7Q9NR12 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.33■■□□□ 1.01
PDLIM7Q9NR12 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PDLIM7Q9NR12 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.33■■□□□ 1
PDLIM7Q9NR12 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.33■■□□□ 1
PDLIM7Q9NR12 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
PDLIM7Q9NR12 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
PDLIM7Q9NR12 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PDLIM7Q9NR12 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
PDLIM7Q9NR12 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.33■■□□□ 1
PDLIM7Q9NR12 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PDLIM7Q9NR12 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PDLIM7Q9NR12 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PDLIM7Q9NR12 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM7Q9NR12 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM7Q9NR12 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM7Q9NR12 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.32■■□□□ 1
PDLIM7Q9NR12 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM7Q9NR12 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.32■■□□□ 1
PDLIM7Q9NR12 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM7Q9NR12 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM7Q9NR12 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
PDLIM7Q9NR12 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.32■■□□□ 1
PDLIM7Q9NR12 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC21.32■■□□□ 1
PDLIM7Q9NR12 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.32■■□□□ 1
PDLIM7Q9NR12 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.32■■□□□ 1
PDLIM7Q9NR12 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.32■■□□□ 1
PDLIM7Q9NR12 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.32■■□□□ 1
PDLIM7Q9NR12 PRELID1P1-202ENST00000567272 903 ntBASIC21.32■■□□□ 1
PDLIM7Q9NR12 MIR3652-201ENST00000579335 131 ntBASIC21.32■■□□□ 1
PDLIM7Q9NR12 NEK4P2-201ENST00000580004 1012 ntBASIC21.32■■□□□ 1
PDLIM7Q9NR12 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
PDLIM7Q9NR12 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM7Q9NR12 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PDLIM7Q9NR12 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM7Q9NR12 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.32■■□□□ 1
PDLIM7Q9NR12 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.32■■□□□ 1
PDLIM7Q9NR12 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM7Q9NR12 Z82202.1-201ENST00000623446 1880 ntBASIC21.32■■□□□ 1
PDLIM7Q9NR12 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PDLIM7Q9NR12 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
PDLIM7Q9NR12 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.32■■□□□ 1
PDLIM7Q9NR12 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDLIM7Q9NR12 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.31■■□□□ 1
PDLIM7Q9NR12 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.31■■□□□ 1
PDLIM7Q9NR12 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM7Q9NR12 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDLIM7Q9NR12 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.31■■□□□ 1
PDLIM7Q9NR12 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM7Q9NR12 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDLIM7Q9NR12 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.31■■□□□ 1
PDLIM7Q9NR12 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDLIM7Q9NR12 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.31■■□□□ 1
PDLIM7Q9NR12 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM7Q9NR12 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM7Q9NR12 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM7Q9NR12 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM7Q9NR12 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDLIM7Q9NR12 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDLIM7Q9NR12 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDLIM7Q9NR12 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
PDLIM7Q9NR12 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDLIM7Q9NR12 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDLIM7Q9NR12 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDLIM7Q9NR12 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.3■■□□□ 1
PDLIM7Q9NR12 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.3■■□□□ 1
PDLIM7Q9NR12 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
PDLIM7Q9NR12 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDLIM7Q9NR12 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDLIM7Q9NR12 AL845331.1-201ENST00000424978 1190 ntBASIC21.3■■□□□ 1
PDLIM7Q9NR12 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC21.3■■□□□ 1
PDLIM7Q9NR12 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.3■■□□□ 1
PDLIM7Q9NR12 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.3■■□□□ 1
PDLIM7Q9NR12 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDLIM7Q9NR12 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDLIM7Q9NR12 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.3■■□□□ 1
PDLIM7Q9NR12 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.3■■□□□ 1
PDLIM7Q9NR12 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDLIM7Q9NR12 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
PDLIM7Q9NR12 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.3■■□□□ 1
PDLIM7Q9NR12 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms