Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS4Q9NQG7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 AC099778.1-201ENST00000568593 1911 ntBASIC19.67■□□□□ 0.74
HPS4Q9NQG7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 AC009947.2-201ENST00000444014 672 ntBASIC19.67■□□□□ 0.74
HPS4Q9NQG7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS4Q9NQG7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 AC104417.2-201ENST00000562989 1793 ntBASIC19.66■□□□□ 0.74
HPS4Q9NQG7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 MIR4674-201ENST00000582457 87 ntBASIC19.66■□□□□ 0.74
HPS4Q9NQG7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 IER3-202ENST00000376377 1350 ntBASIC19.66■□□□□ 0.74
HPS4Q9NQG7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 PCDHAC2-203ENST00000615316 3011 ntBASIC19.66■□□□□ 0.74
HPS4Q9NQG7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS4Q9NQG7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS4Q9NQG7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.65■□□□□ 0.74
HPS4Q9NQG7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS4Q9NQG7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS4Q9NQG7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS4Q9NQG7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS4Q9NQG7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HPS4Q9NQG7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.65■□□□□ 0.74
HPS4Q9NQG7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.65■□□□□ 0.74
HPS4Q9NQG7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS4Q9NQG7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HPS4Q9NQG7 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.65■□□□□ 0.74
HPS4Q9NQG7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HPS4Q9NQG7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HPS4Q9NQG7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HPS4Q9NQG7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HPS4Q9NQG7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HPS4Q9NQG7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HPS4Q9NQG7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HPS4Q9NQG7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms