Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.28■□□□□ 0.36
HMG20AQ9NP66 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.27■□□□□ 0.36
HMG20AQ9NP66 FP475955.4-201ENST00000623131 1990 ntBASIC17.27■□□□□ 0.36
HMG20AQ9NP66 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HMG20AQ9NP66 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMG20AQ9NP66 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMG20AQ9NP66 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HMG20AQ9NP66 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.27■□□□□ 0.35
HMG20AQ9NP66 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.27■□□□□ 0.35
HMG20AQ9NP66 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HMG20AQ9NP66 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.27■□□□□ 0.35
HMG20AQ9NP66 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMG20AQ9NP66 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.27■□□□□ 0.35
HMG20AQ9NP66 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMG20AQ9NP66 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMG20AQ9NP66 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 ESPNP-201ENST00000270691 2015 ntBASIC17.26■□□□□ 0.35
HMG20AQ9NP66 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 AC008764.6-201ENST00000595909 2069 ntBASIC17.26■□□□□ 0.35
HMG20AQ9NP66 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.26■□□□□ 0.35
HMG20AQ9NP66 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HMG20AQ9NP66 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.25■□□□□ 0.35
HMG20AQ9NP66 KRT8P36-201ENST00000489121 1440 ntBASIC17.25■□□□□ 0.35
HMG20AQ9NP66 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms