Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 TSPY15P-201ENST00000457163 923 ntBASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 AL355075.4-201ENST00000554988 638 ntBASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 AF186192.3-201ENST00000583427 947 ntBASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 AL031963.3-201ENST00000606441 850 ntBASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 AL133373.2-201ENST00000623187 2828 ntBASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAF4Q9BUZ4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAF4Q9BUZ4 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.02■□□□□ 0.31
TRAF4Q9BUZ4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRAF4Q9BUZ4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TRAF4Q9BUZ4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAF4Q9BUZ4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.02■□□□□ 0.31
TRAF4Q9BUZ4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TRAF4Q9BUZ4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAF4Q9BUZ4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.02■□□□□ 0.31
TRAF4Q9BUZ4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAF4Q9BUZ4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TRAF4Q9BUZ4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAF4Q9BUZ4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAF4Q9BUZ4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 AC004264.1-201ENST00000608354 794 ntBASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 AC026471.5-201ENST00000615068 467 ntBASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 KRT8P20-201ENST00000423953 1409 ntBASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAF4Q9BUZ4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAF4Q9BUZ4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRAF4Q9BUZ4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF4Q9BUZ4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.99■□□□□ 0.31
TRAF4Q9BUZ4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAF4Q9BUZ4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms