Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 RGMA-211ENST00000557420 989 ntTSL 3 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 AC092666.2-201ENST00000613287 246 ntBASIC11.34□□□□□ -0.59
LIMD2Q9BT23 AL109923.1-201ENST00000618799 583 ntBASIC11.34□□□□□ -0.59
LIMD2Q9BT23 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
LIMD2Q9BT23 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
LIMD2Q9BT23 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
LIMD2Q9BT23 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 OR2A1-AS1-207ENST00000486094 819 ntBASIC11.33□□□□□ -0.6
LIMD2Q9BT23 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 BET1L-207ENST00000529614 560 ntTSL 5 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC11.33□□□□□ -0.6
LIMD2Q9BT23 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LIMD2Q9BT23 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms