Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 CA15P1-201ENST00000481698 905 ntBASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 FITM1-202ENST00000559294 800 ntBASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 AC087289.5-201ENST00000586076 3175 ntBASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTHRC1Q96CG8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTHRC1Q96CG8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 CROCCP3-202ENST00000420820 1947 ntBASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 CRYGFP-201ENST00000418459 633 ntBASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CTHRC1Q96CG8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CTHRC1Q96CG8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.64■□□□□ 0.42
CTHRC1Q96CG8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 TSPY15P-201ENST00000457163 923 ntBASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 AP000525.1-201ENST00000608286 694 ntBASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 AC083906.6-201ENST00000641366 219 ntBASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CTHRC1Q96CG8 KRT8P32-201ENST00000512863 1461 ntBASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CTHRC1Q96CG8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms