Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF111Q6ZNA4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 AC093525.10-201ENST00000625130 1569 ntBASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 AC124283.5-201ENST00000624661 1809 ntBASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 AL121906.2-201ENST00000621597 723 ntBASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 TEX21P-204ENST00000641479 1693 ntBASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF111Q6ZNA4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF111Q6ZNA4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RNF111Q6ZNA4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
RNF111Q6ZNA4 PHGDH-210ENST00000641115 1638 ntBASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 AC069544.1-201ENST00000609399 999 ntBASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 AC012313.1-201ENST00000593393 3059 ntBASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF111Q6ZNA4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms