Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RNF43Q68DV7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF43Q68DV7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF43Q68DV7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF43Q68DV7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF43Q68DV7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF43Q68DV7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF43Q68DV7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF43Q68DV7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF43Q68DV7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RNF43Q68DV7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF43Q68DV7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF43Q68DV7 LINC01568-207ENST00000641790 1380 ntBASIC19.95■□□□□ 0.79
RNF43Q68DV7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF43Q68DV7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF43Q68DV7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF43Q68DV7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF43Q68DV7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF43Q68DV7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF43Q68DV7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF43Q68DV7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF43Q68DV7 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF43Q68DV7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF43Q68DV7 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF43Q68DV7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF43Q68DV7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF43Q68DV7 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF43Q68DV7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF43Q68DV7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 AC131212.4-201ENST00000623606 975 ntBASIC19.95■□□□□ 0.78
RNF43Q68DV7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF43Q68DV7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF43Q68DV7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF43Q68DV7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF43Q68DV7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF43Q68DV7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
RNF43Q68DV7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF43Q68DV7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF43Q68DV7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF43Q68DV7 AL137013.1-201ENST00000432946 1228 ntBASIC19.94■□□□□ 0.78
RNF43Q68DV7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF43Q68DV7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF43Q68DV7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
RNF43Q68DV7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF43Q68DV7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF43Q68DV7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF43Q68DV7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.94■□□□□ 0.78
RNF43Q68DV7 AP000525.1-201ENST00000608286 694 ntBASIC19.94■□□□□ 0.78
RNF43Q68DV7 AC130371.2-201ENST00000619443 611 ntBASIC19.94■□□□□ 0.78
RNF43Q68DV7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF43Q68DV7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF43Q68DV7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF43Q68DV7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF43Q68DV7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF43Q68DV7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF43Q68DV7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF43Q68DV7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF43Q68DV7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF43Q68DV7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RNF43Q68DV7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RNF43Q68DV7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF43Q68DV7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF43Q68DV7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
RNF43Q68DV7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF43Q68DV7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
RNF43Q68DV7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF43Q68DV7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF43Q68DV7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF43Q68DV7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF43Q68DV7 AP005242.2-201ENST00000580065 1175 ntBASIC19.93■□□□□ 0.78
RNF43Q68DV7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.93■□□□□ 0.78
RNF43Q68DV7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.93■□□□□ 0.78
RNF43Q68DV7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
RNF43Q68DV7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RNF43Q68DV7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF43Q68DV7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF43Q68DV7 KRT8P9-201ENST00000558927 1449 ntBASIC19.93■□□□□ 0.78
RNF43Q68DV7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF43Q68DV7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF43Q68DV7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms