Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.2■□□□□ 0.66
LGSNQ5TDP6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.2■□□□□ 0.66
LGSNQ5TDP6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LGSNQ5TDP6 PKD1P1-201ENST00000458669 6805 ntBASIC19.2■□□□□ 0.66
LGSNQ5TDP6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.2■□□□□ 0.66
LGSNQ5TDP6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LGSNQ5TDP6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.2■□□□□ 0.66
LGSNQ5TDP6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LGSNQ5TDP6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LGSNQ5TDP6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LGSNQ5TDP6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LGSNQ5TDP6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
LGSNQ5TDP6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 AC124283.5-201ENST00000624661 1809 ntBASIC19.19■□□□□ 0.66
LGSNQ5TDP6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 TUBB8P6-201ENST00000436895 1288 ntBASIC19.19■□□□□ 0.66
LGSNQ5TDP6 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.19■□□□□ 0.66
LGSNQ5TDP6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LGSNQ5TDP6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LGSNQ5TDP6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.17■□□□□ 0.66
LGSNQ5TDP6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 KRT18P16-201ENST00000510337 1294 ntBASIC19.17■□□□□ 0.66
LGSNQ5TDP6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.17■□□□□ 0.66
LGSNQ5TDP6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms