Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ERCC6LQ2NKX8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 HLA-G-202ENST00000376815 851 ntBASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 HLA-G-203ENST00000376818 1127 ntBASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 AL031432.3-201ENST00000607698 485 ntBASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ERCC6LQ2NKX8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 AL136967.2-201ENST00000623968 743 ntBASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ERCC6LQ2NKX8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ERCC6LQ2NKX8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
ERCC6LQ2NKX8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ERCC6LQ2NKX8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
ERCC6LQ2NKX8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
ERCC6LQ2NKX8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.14■□□□□ 0.81
ERCC6LQ2NKX8 SUDS3P1-201ENST00000505831 966 ntBASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms