Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.2■□□□□ 0.66
PRAMEP78395 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEP78395 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.19■□□□□ 0.66
PRAMEP78395 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.19■□□□□ 0.66
PRAMEP78395 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.19■□□□□ 0.66
PRAMEP78395 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEP78395 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEP78395 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEP78395 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEP78395 RPPH1-201ENST00000516869 333 ntBASIC19.19■□□□□ 0.66
PRAMEP78395 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.19■□□□□ 0.66
PRAMEP78395 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.19■□□□□ 0.66
PRAMEP78395 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEP78395 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEP78395 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEP78395 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PRAMEP78395 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEP78395 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PRAMEP78395 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEP78395 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEP78395 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PRAMEP78395 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.19■□□□□ 0.66
PRAMEP78395 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEP78395 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.18■□□□□ 0.66
PRAMEP78395 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEP78395 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEP78395 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PRAMEP78395 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEP78395 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.18■□□□□ 0.66
PRAMEP78395 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.18■□□□□ 0.66
PRAMEP78395 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEP78395 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.18■□□□□ 0.66
PRAMEP78395 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.18■□□□□ 0.66
PRAMEP78395 ITM2C-210ENST00000620962 501 ntBASIC19.18■□□□□ 0.66
PRAMEP78395 FAM197Y4-202ENST00000622692 608 ntBASIC19.18■□□□□ 0.66
PRAMEP78395 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEP78395 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.18■□□□□ 0.66
PRAMEP78395 FP475955.4-201ENST00000623131 1990 ntBASIC19.18■□□□□ 0.66
PRAMEP78395 IRX1P1-201ENST00000438849 1838 ntBASIC19.18■□□□□ 0.66
PRAMEP78395 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PRAMEP78395 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.18■□□□□ 0.66
PRAMEP78395 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEP78395 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRAMEP78395 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.18■□□□□ 0.66
PRAMEP78395 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
PRAMEP78395 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PRAMEP78395 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PRAMEP78395 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.17■□□□□ 0.66
PRAMEP78395 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.17■□□□□ 0.66
PRAMEP78395 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.17■□□□□ 0.66
PRAMEP78395 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.17■□□□□ 0.66
PRAMEP78395 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
PRAMEP78395 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 AP002982.1-201ENST00000492365 877 ntBASIC19.17■□□□□ 0.66
PRAMEP78395 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.17■□□□□ 0.66
PRAMEP78395 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.17■□□□□ 0.66
PRAMEP78395 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
PRAMEP78395 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
PRAMEP78395 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 HTR7P1-201ENST00000538670 1336 ntBASIC19.17■□□□□ 0.66
PRAMEP78395 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PRAMEP78395 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PRAMEP78395 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PRAMEP78395 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PRAMEP78395 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.16■□□□□ 0.66
PRAMEP78395 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.16■□□□□ 0.66
PRAMEP78395 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEP78395 AL353807.1-201ENST00000427475 662 ntBASIC19.16■□□□□ 0.66
PRAMEP78395 TSPY21P-201ENST00000433481 731 ntBASIC19.16■□□□□ 0.66
PRAMEP78395 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PRAMEP78395 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.16■□□□□ 0.66
PRAMEP78395 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms