Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
AP3S2P59780 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.36■□□□□ 0.21
AP3S2P59780 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.36■□□□□ 0.21
AP3S2P59780 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.36■□□□□ 0.21
AP3S2P59780 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.36■□□□□ 0.21
AP3S2P59780 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S2P59780 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S2P59780 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S2P59780 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.36■□□□□ 0.21
AP3S2P59780 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S2P59780 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
AP3S2P59780 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S2P59780 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S2P59780 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S2P59780 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.36■□□□□ 0.21
AP3S2P59780 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.36■□□□□ 0.21
AP3S2P59780 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
AP3S2P59780 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S2P59780 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S2P59780 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
AP3S2P59780 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3S2P59780 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S2P59780 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.35■□□□□ 0.21
AP3S2P59780 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S2P59780 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S2P59780 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S2P59780 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S2P59780 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S2P59780 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
AP3S2P59780 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
AP3S2P59780 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.35■□□□□ 0.21
AP3S2P59780 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S2P59780 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
AP3S2P59780 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.35■□□□□ 0.21
AP3S2P59780 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.35■□□□□ 0.21
AP3S2P59780 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
AP3S2P59780 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S2P59780 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S2P59780 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S2P59780 AC019069.1-201ENST00000610008 1333 ntBASIC16.35■□□□□ 0.21
AP3S2P59780 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S2P59780 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.35■□□□□ 0.21
AP3S2P59780 SIRPAP1-201ENST00000448467 1770 ntBASIC16.35■□□□□ 0.21
AP3S2P59780 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.35■□□□□ 0.21
AP3S2P59780 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.35■□□□□ 0.21
AP3S2P59780 RASA4CP-201ENST00000424092 1398 ntBASIC16.35■□□□□ 0.21
AP3S2P59780 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S2P59780 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
AP3S2P59780 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
AP3S2P59780 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S2P59780 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S2P59780 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S2P59780 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.35■□□□□ 0.21
AP3S2P59780 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
AP3S2P59780 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3S2P59780 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3S2P59780 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.34■□□□□ 0.21
AP3S2P59780 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
AP3S2P59780 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3S2P59780 GNAS-203ENST00000306120 1878 ntBASIC16.34■□□□□ 0.21
AP3S2P59780 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 AL356441.2-201ENST00000443009 864 ntBASIC16.34■□□□□ 0.21
AP3S2P59780 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3S2P59780 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3S2P59780 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.34■□□□□ 0.21
AP3S2P59780 AC083906.6-201ENST00000641366 219 ntBASIC16.34■□□□□ 0.21
AP3S2P59780 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.34■□□□□ 0.21
AP3S2P59780 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.34■□□□□ 0.21
AP3S2P59780 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.34■□□□□ 0.21
AP3S2P59780 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
AP3S2P59780 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
AP3S2P59780 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.34■□□□□ 0.21
AP3S2P59780 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
AP3S2P59780 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.33■□□□□ 0.21
AP3S2P59780 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
AP3S2P59780 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
AP3S2P59780 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
AP3S2P59780 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.33■□□□□ 0.21
AP3S2P59780 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AP3S2P59780 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
AP3S2P59780 ESPNP-201ENST00000270691 2015 ntBASIC16.33■□□□□ 0.21
AP3S2P59780 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.33■□□□□ 0.2
AP3S2P59780 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms