Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATN1P54259 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATN1P54259 CLDN5-201ENST00000403084 2357 ntBASIC20.97■□□□□ 0.95
ATN1P54259 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATN1P54259 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
ATN1P54259 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.97■□□□□ 0.95
ATN1P54259 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATN1P54259 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATN1P54259 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.97■□□□□ 0.95
ATN1P54259 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATN1P54259 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.97■□□□□ 0.95
ATN1P54259 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATN1P54259 KRT16P4-201ENST00000453883 522 ntBASIC20.97■□□□□ 0.95
ATN1P54259 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC20.97■□□□□ 0.95
ATN1P54259 AC104819.1-201ENST00000504587 486 ntBASIC20.97■□□□□ 0.95
ATN1P54259 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATN1P54259 AL121912.1-201ENST00000603683 238 ntBASIC20.97■□□□□ 0.95
ATN1P54259 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
ATN1P54259 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ATN1P54259 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ATN1P54259 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.97■□□□□ 0.95
ATN1P54259 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATN1P54259 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATN1P54259 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ATN1P54259 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATN1P54259 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.96■□□□□ 0.95
ATN1P54259 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATN1P54259 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATN1P54259 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATN1P54259 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATN1P54259 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATN1P54259 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATN1P54259 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATN1P54259 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.96■□□□□ 0.95
ATN1P54259 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.96■□□□□ 0.95
ATN1P54259 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.96■□□□□ 0.95
ATN1P54259 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATN1P54259 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATN1P54259 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATN1P54259 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATN1P54259 HLA-A-201ENST00000376802 1334 ntBASIC20.96■□□□□ 0.95
ATN1P54259 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ATN1P54259 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.96■□□□□ 0.95
ATN1P54259 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.96■□□□□ 0.95
ATN1P54259 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.96■□□□□ 0.95
ATN1P54259 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ATN1P54259 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ATN1P54259 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATN1P54259 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
ATN1P54259 AL691432.2-201ENST00000607222 2038 ntBASIC20.95■□□□□ 0.94
ATN1P54259 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ATN1P54259 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATN1P54259 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATN1P54259 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATN1P54259 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATN1P54259 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATN1P54259 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATN1P54259 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ATN1P54259 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATN1P54259 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATN1P54259 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATN1P54259 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATN1P54259 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.95■□□□□ 0.94
ATN1P54259 AL590627.1-203ENST00000421194 1026 ntBASIC20.95■□□□□ 0.94
ATN1P54259 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.95■□□□□ 0.94
ATN1P54259 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.95■□□□□ 0.94
ATN1P54259 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
ATN1P54259 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.95■□□□□ 0.94
ATN1P54259 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.95■□□□□ 0.94
ATN1P54259 AC074051.2-201ENST00000565115 352 ntBASIC20.95■□□□□ 0.94
ATN1P54259 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.95■□□□□ 0.94
ATN1P54259 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.95■□□□□ 0.94
ATN1P54259 AP005212.1-201ENST00000581547 1997 ntBASIC20.95■□□□□ 0.94
ATN1P54259 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATN1P54259 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATN1P54259 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATN1P54259 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATN1P54259 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.95■□□□□ 0.94
ATN1P54259 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ATN1P54259 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATN1P54259 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATN1P54259 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATN1P54259 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATN1P54259 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATN1P54259 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATN1P54259 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATN1P54259 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.94■□□□□ 0.94
ATN1P54259 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.94■□□□□ 0.94
ATN1P54259 MTATP6P19-201ENST00000413797 659 ntBASIC20.94■□□□□ 0.94
ATN1P54259 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.94■□□□□ 0.94
ATN1P54259 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.94■□□□□ 0.94
ATN1P54259 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.94■□□□□ 0.94
ATN1P54259 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.94■□□□□ 0.94
ATN1P54259 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ATN1P54259 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.94■□□□□ 0.94
ATN1P54259 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATN1P54259 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATN1P54259 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.94■□□□□ 0.94
ATN1P54259 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.94■□□□□ 0.94
ATN1P54259 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms