Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA8P53708 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.54■□□□□ 0.72
ITGA8P53708 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA8P53708 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA8P53708 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.54■□□□□ 0.72
ITGA8P53708 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.54■□□□□ 0.72
ITGA8P53708 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.54■□□□□ 0.72
ITGA8P53708 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.54■□□□□ 0.72
ITGA8P53708 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
ITGA8P53708 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.54■□□□□ 0.72
ITGA8P53708 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ITGA8P53708 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.54■□□□□ 0.72
ITGA8P53708 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.54■□□□□ 0.72
ITGA8P53708 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.54■□□□□ 0.72
ITGA8P53708 AC120498.8-201ENST00000614275 531 ntBASIC19.54■□□□□ 0.72
ITGA8P53708 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ITGA8P53708 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA8P53708 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA8P53708 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA8P53708 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA8P53708 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ITGA8P53708 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
ITGA8P53708 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
ITGA8P53708 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA8P53708 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA8P53708 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.54■□□□□ 0.72
ITGA8P53708 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.54■□□□□ 0.72
ITGA8P53708 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA8P53708 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ITGA8P53708 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.53■□□□□ 0.72
ITGA8P53708 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ITGA8P53708 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ITGA8P53708 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.53■□□□□ 0.72
ITGA8P53708 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.53■□□□□ 0.72
ITGA8P53708 PNMA6B-201ENST00000538162 1200 ntBASIC19.53■□□□□ 0.72
ITGA8P53708 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.53■□□□□ 0.72
ITGA8P53708 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.53■□□□□ 0.72
ITGA8P53708 MYC-209ENST00000641252 345 ntBASIC19.53■□□□□ 0.72
ITGA8P53708 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ITGA8P53708 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ITGA8P53708 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ITGA8P53708 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ITGA8P53708 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ITGA8P53708 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.53■□□□□ 0.72
ITGA8P53708 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ITGA8P53708 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA8P53708 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.52■□□□□ 0.72
ITGA8P53708 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA8P53708 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.52■□□□□ 0.72
ITGA8P53708 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA8P53708 NOC2LP1-202ENST00000452600 2235 ntBASIC19.52■□□□□ 0.72
ITGA8P53708 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA8P53708 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.52■□□□□ 0.72
ITGA8P53708 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA8P53708 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA8P53708 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA8P53708 ID1-201ENST00000376105 1233 ntBASIC19.52■□□□□ 0.72
ITGA8P53708 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ITGA8P53708 GUSBP6-202ENST00000438529 1198 ntBASIC19.52■□□□□ 0.72
ITGA8P53708 AC006970.2-201ENST00000450065 779 ntBASIC19.52■□□□□ 0.72
ITGA8P53708 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.52■□□□□ 0.72
ITGA8P53708 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.52■□□□□ 0.72
ITGA8P53708 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.52■□□□□ 0.72
ITGA8P53708 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ITGA8P53708 AL121829.2-201ENST00000620908 328 ntBASIC19.52■□□□□ 0.72
ITGA8P53708 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA8P53708 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA8P53708 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA8P53708 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.52■□□□□ 0.72
ITGA8P53708 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ITGA8P53708 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.52■□□□□ 0.72
ITGA8P53708 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
ITGA8P53708 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ITGA8P53708 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ITGA8P53708 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ITGA8P53708 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ITGA8P53708 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ITGA8P53708 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.51■□□□□ 0.71
ITGA8P53708 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ITGA8P53708 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.51■□□□□ 0.71
ITGA8P53708 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ITGA8P53708 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms