Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.35
CXCL5P42830 IRX1P1-201ENST00000438849 1838 ntBASIC12.83□□□□□ -0.35
CXCL5P42830 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
CXCL5P42830 MOK-233ENST00000524214 1539 ntTSL 2 BASIC12.83□□□□□ -0.35
CXCL5P42830 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.83□□□□□ -0.36
CXCL5P42830 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
CXCL5P42830 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CXCL5P42830 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC12.83□□□□□ -0.36
CXCL5P42830 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC12.83□□□□□ -0.36
CXCL5P42830 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC12.83□□□□□ -0.36
CXCL5P42830 AC007322.1-201ENST00000426983 750 ntBASIC12.83□□□□□ -0.36
CXCL5P42830 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 ISCU-212ENST00000547005 795 ntTSL 3 BASIC12.83□□□□□ -0.36
CXCL5P42830 MAX-217ENST00000557277 728 ntTSL 3 BASIC12.83□□□□□ -0.36
CXCL5P42830 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC12.83□□□□□ -0.36
CXCL5P42830 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC12.83□□□□□ -0.36
CXCL5P42830 RAP2CP1-201ENST00000605103 478 ntBASIC12.83□□□□□ -0.36
CXCL5P42830 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CXCL5P42830 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC12.83□□□□□ -0.36
CXCL5P42830 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CXCL5P42830 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CXCL5P42830 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC12.82□□□□□ -0.36
CXCL5P42830 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCL5P42830 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCL5P42830 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CXCL5P42830 ANKRD18DP-204ENST00000455355 1975 ntBASIC12.82□□□□□ -0.36
CXCL5P42830 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL5P42830 LSM12P1-201ENST00000411836 588 ntBASIC12.82□□□□□ -0.36
CXCL5P42830 AL355472.2-201ENST00000422958 438 ntBASIC12.82□□□□□ -0.36
CXCL5P42830 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL5P42830 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC12.82□□□□□ -0.36
CXCL5P42830 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL5P42830 PARP1-210ENST00000629232 477 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCL5P42830 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL5P42830 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCL5P42830 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CXCL5P42830 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC12.82□□□□□ -0.36
CXCL5P42830 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CXCL5P42830 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCL5P42830 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 NFIC-211ENST00000641145 8399 ntBASIC12.82□□□□□ -0.36
CXCL5P42830 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 AC090164.3-201ENST00000610780 2143 ntBASIC12.82□□□□□ -0.36
CXCL5P42830 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCL5P42830 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCL5P42830 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.82□□□□□ -0.36
CXCL5P42830 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CXCL5P42830 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CXCL5P42830 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms