Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.38■□□□□ 0.69
NFKB1P19838 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NFKB1P19838 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.37■□□□□ 0.69
NFKB1P19838 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.37■□□□□ 0.69
NFKB1P19838 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NFKB1P19838 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NFKB1P19838 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NFKB1P19838 CROCCP3-202ENST00000420820 1947 ntBASIC19.37■□□□□ 0.69
NFKB1P19838 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NFKB1P19838 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.37■□□□□ 0.69
NFKB1P19838 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NFKB1P19838 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NFKB1P19838 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NFKB1P19838 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NFKB1P19838 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
NFKB1P19838 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NFKB1P19838 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NFKB1P19838 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
NFKB1P19838 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.37■□□□□ 0.69
NFKB1P19838 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NFKB1P19838 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NFKB1P19838 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NFKB1P19838 AC004951.3-201ENST00000418645 1148 ntBASIC19.37■□□□□ 0.69
NFKB1P19838 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NFKB1P19838 AC026271.3-201ENST00000571884 352 ntBASIC19.37■□□□□ 0.69
NFKB1P19838 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.37■□□□□ 0.69
NFKB1P19838 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NFKB1P19838 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NFKB1P19838 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NFKB1P19838 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NFKB1P19838 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NFKB1P19838 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NFKB1P19838 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NFKB1P19838 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
NFKB1P19838 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NFKB1P19838 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NFKB1P19838 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NFKB1P19838 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NFKB1P19838 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NFKB1P19838 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NFKB1P19838 AL135905.2-201ENST00000584934 1404 ntBASIC19.36■□□□□ 0.69
NFKB1P19838 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.36■□□□□ 0.69
NFKB1P19838 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NFKB1P19838 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NFKB1P19838 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.36■□□□□ 0.69
NFKB1P19838 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
NFKB1P19838 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NFKB1P19838 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.36■□□□□ 0.69
NFKB1P19838 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NFKB1P19838 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NFKB1P19838 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.36■□□□□ 0.69
NFKB1P19838 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NFKB1P19838 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NFKB1P19838 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NFKB1P19838 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.35■□□□□ 0.69
NFKB1P19838 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NFKB1P19838 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.35■□□□□ 0.69
NFKB1P19838 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.35■□□□□ 0.69
NFKB1P19838 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.35■□□□□ 0.69
NFKB1P19838 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NFKB1P19838 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
NFKB1P19838 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NFKB1P19838 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.35■□□□□ 0.69
NFKB1P19838 AC008040.2-201ENST00000461049 708 ntBASIC19.35■□□□□ 0.69
NFKB1P19838 AC011506.1-201ENST00000474329 610 ntBASIC19.35■□□□□ 0.69
NFKB1P19838 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NFKB1P19838 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.35■□□□□ 0.69
NFKB1P19838 CD177P1-201ENST00000606252 935 ntBASIC19.35■□□□□ 0.69
NFKB1P19838 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.35■□□□□ 0.69
NFKB1P19838 AC011298.2-201ENST00000617989 482 ntBASIC19.35■□□□□ 0.69
NFKB1P19838 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.35■□□□□ 0.69
NFKB1P19838 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.35■□□□□ 0.69
NFKB1P19838 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NFKB1P19838 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NFKB1P19838 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NFKB1P19838 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
NFKB1P19838 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NFKB1P19838 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NFKB1P19838 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NFKB1P19838 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NFKB1P19838 RPS2P55-201ENST00000397318 883 ntBASIC19.34■□□□□ 0.69
NFKB1P19838 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NFKB1P19838 AC107956.1-201ENST00000494359 873 ntBASIC19.34■□□□□ 0.69
NFKB1P19838 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.34■□□□□ 0.69
NFKB1P19838 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.34■□□□□ 0.69
NFKB1P19838 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NFKB1P19838 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NFKB1P19838 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.34■□□□□ 0.69
NFKB1P19838 TMEM191A-211ENST00000637163 1067 ntBASIC19.34■□□□□ 0.69
NFKB1P19838 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NFKB1P19838 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NFKB1P19838 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NFKB1P19838 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NFKB1P19838 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NFKB1P19838 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NFKB1P19838 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NFKB1P19838 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NFKB1P19838 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NFKB1P19838 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
NFKB1P19838 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms