Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC2P18074 SNORA78-201ENST00000459373 127 ntBASIC19.61■□□□□ 0.73
ERCC2P18074 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.61■□□□□ 0.73
ERCC2P18074 AP003071.4-201ENST00000562276 1284 ntBASIC19.61■□□□□ 0.73
ERCC2P18074 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.61■□□□□ 0.73
ERCC2P18074 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
ERCC2P18074 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC2P18074 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ERCC2P18074 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ERCC2P18074 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC2P18074 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC2P18074 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC2P18074 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC2P18074 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.61■□□□□ 0.73
ERCC2P18074 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC2P18074 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ERCC2P18074 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.6■□□□□ 0.73
ERCC2P18074 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ERCC2P18074 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC2P18074 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC2P18074 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC2P18074 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC2P18074 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.6■□□□□ 0.73
ERCC2P18074 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC2P18074 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.6■□□□□ 0.73
ERCC2P18074 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC2P18074 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC2P18074 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
ERCC2P18074 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ERCC2P18074 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
ERCC2P18074 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.6■□□□□ 0.73
ERCC2P18074 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.6■□□□□ 0.73
ERCC2P18074 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
ERCC2P18074 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.6■□□□□ 0.73
ERCC2P18074 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.6■□□□□ 0.73
ERCC2P18074 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ERCC2P18074 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC2P18074 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
ERCC2P18074 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ERCC2P18074 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
ERCC2P18074 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC2P18074 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.59■□□□□ 0.73
ERCC2P18074 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC2P18074 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC2P18074 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC2P18074 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ERCC2P18074 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC2P18074 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.59■□□□□ 0.73
ERCC2P18074 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.59■□□□□ 0.73
ERCC2P18074 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC2P18074 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
ERCC2P18074 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.59■□□□□ 0.73
ERCC2P18074 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC2P18074 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC2P18074 CKBP1-201ENST00000565489 1086 ntBASIC19.59■□□□□ 0.73
ERCC2P18074 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
ERCC2P18074 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.59■□□□□ 0.73
ERCC2P18074 AC066615.1-201ENST00000640911 628 ntBASIC19.59■□□□□ 0.73
ERCC2P18074 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC2P18074 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC2P18074 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.59■□□□□ 0.73
ERCC2P18074 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.59■□□□□ 0.73
ERCC2P18074 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC2P18074 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ERCC2P18074 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.59■□□□□ 0.73
ERCC2P18074 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.59■□□□□ 0.73
ERCC2P18074 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.58■□□□□ 0.73
ERCC2P18074 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ERCC2P18074 AC006333.2-201ENST00000607957 2099 ntBASIC19.58■□□□□ 0.73
ERCC2P18074 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.58■□□□□ 0.73
ERCC2P18074 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ERCC2P18074 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ERCC2P18074 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.58■□□□□ 0.73
ERCC2P18074 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ERCC2P18074 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.58■□□□□ 0.73
ERCC2P18074 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ERCC2P18074 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.58■□□□□ 0.72
ERCC2P18074 MIR4785-201ENST00000585005 73 ntBASIC19.58■□□□□ 0.72
ERCC2P18074 DGCR10-201ENST00000609839 495 ntBASIC19.58■□□□□ 0.72
ERCC2P18074 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC2P18074 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
ERCC2P18074 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.58■□□□□ 0.72
ERCC2P18074 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
ERCC2P18074 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
ERCC2P18074 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC2P18074 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.58■□□□□ 0.72
ERCC2P18074 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC2P18074 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ERCC2P18074 TNXA-203ENST00000507684 2038 ntBASIC19.58■□□□□ 0.72
ERCC2P18074 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC2P18074 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC2P18074 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC2P18074 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.57■□□□□ 0.72
ERCC2P18074 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ERCC2P18074 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC2P18074 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC2P18074 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC2P18074 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC2P18074 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ERCC2P18074 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms