Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 TUBB8P6-201ENST00000436895 1288 ntBASIC16.31■□□□□ 0.2
VSIG8P0DPA2 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.31■□□□□ 0.2
VSIG8P0DPA2 AC026185.1-201ENST00000445748 174 ntBASIC16.31■□□□□ 0.2
VSIG8P0DPA2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 AC092118.2-201ENST00000613495 667 ntBASIC16.31■□□□□ 0.2
VSIG8P0DPA2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VSIG8P0DPA2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 NOC2LP1-202ENST00000452600 2235 ntBASIC16.3■□□□□ 0.2
VSIG8P0DPA2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.3■□□□□ 0.2
VSIG8P0DPA2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSIG8P0DPA2 AC092368.3-202ENST00000574180 1591 ntBASIC16.3■□□□□ 0.2
VSIG8P0DPA2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 CROCCP5-201ENST00000436658 830 ntBASIC16.29■□□□□ 0.2
VSIG8P0DPA2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VSIG8P0DPA2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VSIG8P0DPA2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VSIG8P0DPA2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
VSIG8P0DPA2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
VSIG8P0DPA2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
VSIG8P0DPA2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms