Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPNS1P04632 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPNS1P04632 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CAPNS1P04632 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPNS1P04632 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPNS1P04632 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.94■□□□□ 0.62
CAPNS1P04632 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPNS1P04632 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPNS1P04632 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.94■□□□□ 0.62
CAPNS1P04632 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
CAPNS1P04632 AC023632.3-201ENST00000521633 145 ntBASIC18.94■□□□□ 0.62
CAPNS1P04632 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.94■□□□□ 0.62
CAPNS1P04632 AC139887.4-201ENST00000607877 719 ntBASIC18.94■□□□□ 0.62
CAPNS1P04632 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.94■□□□□ 0.62
CAPNS1P04632 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CAPNS1P04632 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
CAPNS1P04632 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPNS1P04632 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.94■□□□□ 0.62
CAPNS1P04632 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CAPNS1P04632 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPNS1P04632 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPNS1P04632 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPNS1P04632 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CAPNS1P04632 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPNS1P04632 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPNS1P04632 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPNS1P04632 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CAPNS1P04632 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.93■□□□□ 0.62
CAPNS1P04632 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPNS1P04632 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.93■□□□□ 0.62
CAPNS1P04632 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.93■□□□□ 0.62
CAPNS1P04632 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.93■□□□□ 0.62
CAPNS1P04632 CLEC4GP1-201ENST00000596555 870 ntBASIC18.93■□□□□ 0.62
CAPNS1P04632 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.93■□□□□ 0.62
CAPNS1P04632 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.93■□□□□ 0.62
CAPNS1P04632 AL121906.2-201ENST00000621597 723 ntBASIC18.93■□□□□ 0.62
CAPNS1P04632 AL121956.5-201ENST00000625261 221 ntBASIC18.93■□□□□ 0.62
CAPNS1P04632 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.93■□□□□ 0.62
CAPNS1P04632 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CAPNS1P04632 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.93■□□□□ 0.62
CAPNS1P04632 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CAPNS1P04632 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CAPNS1P04632 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPNS1P04632 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPNS1P04632 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPNS1P04632 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.92■□□□□ 0.62
CAPNS1P04632 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPNS1P04632 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPNS1P04632 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPNS1P04632 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPNS1P04632 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CAPNS1P04632 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPNS1P04632 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPNS1P04632 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CAPNS1P04632 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPNS1P04632 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPNS1P04632 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPNS1P04632 TSPY5P-201ENST00000426936 936 ntBASIC18.92■□□□□ 0.62
CAPNS1P04632 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.92■□□□□ 0.62
CAPNS1P04632 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPNS1P04632 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.92■□□□□ 0.62
CAPNS1P04632 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPNS1P04632 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPNS1P04632 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPNS1P04632 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CAPNS1P04632 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPNS1P04632 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.92■□□□□ 0.62
CAPNS1P04632 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CAPNS1P04632 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CAPNS1P04632 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CAPNS1P04632 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPNS1P04632 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPNS1P04632 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.91■□□□□ 0.62
CAPNS1P04632 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPNS1P04632 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CAPNS1P04632 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CAPNS1P04632 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CAPNS1P04632 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPNS1P04632 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPNS1P04632 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CAPNS1P04632 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPNS1P04632 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPNS1P04632 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPNS1P04632 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPNS1P04632 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPNS1P04632 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPNS1P04632 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.91■□□□□ 0.62
CAPNS1P04632 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.91■□□□□ 0.62
CAPNS1P04632 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.91■□□□□ 0.62
CAPNS1P04632 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.91■□□□□ 0.62
CAPNS1P04632 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPNS1P04632 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPNS1P04632 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPNS1P04632 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CAPNS1P04632 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CAPNS1P04632 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPNS1P04632 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPNS1P04632 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPNS1P04632 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPNS1P04632 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms