Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
LTAP01374 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTAP01374 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.34□□□□□ -0.11
LTAP01374 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.34□□□□□ -0.11
LTAP01374 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.34□□□□□ -0.11
LTAP01374 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LTAP01374 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LTAP01374 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTAP01374 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.34□□□□□ -0.11
LTAP01374 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTAP01374 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.34□□□□□ -0.11
LTAP01374 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTAP01374 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.34□□□□□ -0.11
LTAP01374 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTAP01374 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
LTAP01374 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTAP01374 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTAP01374 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTAP01374 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTAP01374 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.34□□□□□ -0.11
LTAP01374 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.34□□□□□ -0.11
LTAP01374 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTAP01374 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.34□□□□□ -0.11
LTAP01374 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTAP01374 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LTAP01374 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.34□□□□□ -0.11
LTAP01374 AC126763.1-201ENST00000552015 2118 ntBASIC14.34□□□□□ -0.11
LTAP01374 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LTAP01374 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LTAP01374 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LTAP01374 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTAP01374 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LTAP01374 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.34□□□□□ -0.11
LTAP01374 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
LTAP01374 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTAP01374 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LTAP01374 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LTAP01374 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
LTAP01374 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LTAP01374 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
LTAP01374 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.33□□□□□ -0.11
LTAP01374 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LTAP01374 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
LTAP01374 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTAP01374 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LTAP01374 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTAP01374 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LTAP01374 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTAP01374 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
LTAP01374 KRT17P1-201ENST00000399211 1546 ntBASIC14.33□□□□□ -0.12
LTAP01374 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LTAP01374 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.33□□□□□ -0.12
LTAP01374 GPX1P1-201ENST00000388829 606 ntBASIC14.33□□□□□ -0.12
LTAP01374 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LTAP01374 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.33□□□□□ -0.12
LTAP01374 DUX4L16-201ENST00000555130 1264 ntBASIC14.33□□□□□ -0.12
LTAP01374 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.33□□□□□ -0.12
LTAP01374 NTF6G-201ENST00000591094 616 ntBASIC14.33□□□□□ -0.12
LTAP01374 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
LTAP01374 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.33□□□□□ -0.12
LTAP01374 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.33□□□□□ -0.12
LTAP01374 BID-214ENST00000617586 542 ntTSL 5 BASIC14.33□□□□□ -0.12
LTAP01374 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTAP01374 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTAP01374 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTAP01374 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTAP01374 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
LTAP01374 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTAP01374 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.33□□□□□ -0.12
LTAP01374 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTAP01374 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.33□□□□□ -0.12
LTAP01374 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTAP01374 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
LTAP01374 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.33□□□□□ -0.12
LTAP01374 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTAP01374 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LTAP01374 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.33□□□□□ -0.12
LTAP01374 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.33□□□□□ -0.12
LTAP01374 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LTAP01374 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
LTAP01374 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTAP01374 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LTAP01374 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTAP01374 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTAP01374 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTAP01374 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTAP01374 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTAP01374 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.32□□□□□ -0.12
LTAP01374 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LTAP01374 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTAP01374 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTAP01374 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LTAP01374 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTAP01374 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTAP01374 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTAP01374 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTAP01374 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTAP01374 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTAP01374 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LTAP01374 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms