Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
GGPS1O95749 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
GGPS1O95749 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.38■■□□□ 1.01
GGPS1O95749 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.38■■□□□ 1.01
GGPS1O95749 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
GGPS1O95749 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
GGPS1O95749 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
GGPS1O95749 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
GGPS1O95749 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.38■■□□□ 1.01
GGPS1O95749 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
GGPS1O95749 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.38■■□□□ 1.01
GGPS1O95749 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GGPS1O95749 HOMER2P1-201ENST00000455653 964 ntBASIC21.38■■□□□ 1.01
GGPS1O95749 AL359075.1-203ENST00000462729 1002 ntBASIC21.38■■□□□ 1.01
GGPS1O95749 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.38■■□□□ 1.01
GGPS1O95749 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.38■■□□□ 1.01
GGPS1O95749 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.38■■□□□ 1.01
GGPS1O95749 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.38■■□□□ 1.01
GGPS1O95749 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GGPS1O95749 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
GGPS1O95749 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.38■■□□□ 1.01
GGPS1O95749 AC008622.2-201ENST00000617006 1229 ntBASIC21.38■■□□□ 1.01
GGPS1O95749 AL358472.4-201ENST00000633140 710 ntBASIC21.38■■□□□ 1.01
GGPS1O95749 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.38■■□□□ 1.01
GGPS1O95749 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
GGPS1O95749 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GGPS1O95749 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.38■■□□□ 1.01
GGPS1O95749 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.38■■□□□ 1.01
GGPS1O95749 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
GGPS1O95749 TREX1-205ENST00000625293 1783 ntBASIC21.38■■□□□ 1.01
GGPS1O95749 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
GGPS1O95749 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
GGPS1O95749 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.37■■□□□ 1.01
GGPS1O95749 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
GGPS1O95749 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GGPS1O95749 AC007952.6-201ENST00000573168 2673 ntBASIC21.37■■□□□ 1.01
GGPS1O95749 AC003957.1-201ENST00000625108 2673 ntBASIC21.37■■□□□ 1.01
GGPS1O95749 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.37■■□□□ 1.01
GGPS1O95749 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.37■■□□□ 1.01
GGPS1O95749 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
GGPS1O95749 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.37■■□□□ 1.01
GGPS1O95749 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GGPS1O95749 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
GGPS1O95749 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
GGPS1O95749 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GGPS1O95749 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GGPS1O95749 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
GGPS1O95749 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.37■■□□□ 1.01
GGPS1O95749 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.37■■□□□ 1.01
GGPS1O95749 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.37■■□□□ 1.01
GGPS1O95749 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.37■■□□□ 1.01
GGPS1O95749 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.37■■□□□ 1.01
GGPS1O95749 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
GGPS1O95749 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
GGPS1O95749 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GGPS1O95749 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
GGPS1O95749 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GGPS1O95749 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.37■■□□□ 1.01
GGPS1O95749 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
GGPS1O95749 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.37■■□□□ 1.01
GGPS1O95749 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.37■■□□□ 1.01
GGPS1O95749 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GGPS1O95749 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GGPS1O95749 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
GGPS1O95749 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.36■■□□□ 1.01
GGPS1O95749 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GGPS1O95749 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.36■■□□□ 1.01
GGPS1O95749 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GGPS1O95749 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.36■■□□□ 1.01
GGPS1O95749 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
GGPS1O95749 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.36■■□□□ 1.01
GGPS1O95749 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.36■■□□□ 1.01
GGPS1O95749 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.36■■□□□ 1.01
GGPS1O95749 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.36■■□□□ 1.01
GGPS1O95749 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.36■■□□□ 1.01
GGPS1O95749 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
GGPS1O95749 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.36■■□□□ 1.01
GGPS1O95749 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.36■■□□□ 1.01
GGPS1O95749 AC125437.2-201ENST00000625180 2167 ntBASIC21.36■■□□□ 1.01
GGPS1O95749 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
GGPS1O95749 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GGPS1O95749 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GGPS1O95749 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
GGPS1O95749 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.35■■□□□ 1.01
GGPS1O95749 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GGPS1O95749 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.35■■□□□ 1.01
GGPS1O95749 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.35■■□□□ 1.01
GGPS1O95749 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
GGPS1O95749 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GGPS1O95749 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
GGPS1O95749 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.35■■□□□ 1.01
GGPS1O95749 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.35■■□□□ 1.01
GGPS1O95749 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
GGPS1O95749 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.35■■□□□ 1.01
GGPS1O95749 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
GGPS1O95749 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
GGPS1O95749 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GGPS1O95749 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GGPS1O95749 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.34■■□□□ 1.01
GGPS1O95749 AP000523.1-201ENST00000398242 1049 ntBASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms