Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-2O95096 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-2O95096 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.59■□□□□ 0.41
NKX2-2O95096 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-2O95096 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-2O95096 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.59■□□□□ 0.41
NKX2-2O95096 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.59■□□□□ 0.41
NKX2-2O95096 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.59■□□□□ 0.41
NKX2-2O95096 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
NKX2-2O95096 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.59■□□□□ 0.41
NKX2-2O95096 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.59■□□□□ 0.41
NKX2-2O95096 DGCR10-201ENST00000609839 495 ntBASIC17.59■□□□□ 0.41
NKX2-2O95096 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-2O95096 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-2O95096 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
NKX2-2O95096 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.59■□□□□ 0.41
NKX2-2O95096 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-2O95096 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NKX2-2O95096 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
NKX2-2O95096 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
NKX2-2O95096 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NKX2-2O95096 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NKX2-2O95096 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
NKX2-2O95096 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
NKX2-2O95096 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NKX2-2O95096 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
NKX2-2O95096 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
NKX2-2O95096 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.58■□□□□ 0.41
NKX2-2O95096 AC093503.3-201ENST00000624917 2352 ntBASIC17.58■□□□□ 0.41
NKX2-2O95096 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NKX2-2O95096 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NKX2-2O95096 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.58■□□□□ 0.4
NKX2-2O95096 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.58■□□□□ 0.4
NKX2-2O95096 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
NKX2-2O95096 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
NKX2-2O95096 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.58■□□□□ 0.4
NKX2-2O95096 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.58■□□□□ 0.4
NKX2-2O95096 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.58■□□□□ 0.4
NKX2-2O95096 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.58■□□□□ 0.4
NKX2-2O95096 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NKX2-2O95096 AC083906.6-201ENST00000641366 219 ntBASIC17.58■□□□□ 0.4
NKX2-2O95096 AP006294.2-201ENST00000641667 209 ntBASIC17.58■□□□□ 0.4
NKX2-2O95096 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
NKX2-2O95096 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
NKX2-2O95096 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
NKX2-2O95096 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
NKX2-2O95096 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
NKX2-2O95096 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NKX2-2O95096 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NKX2-2O95096 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NKX2-2O95096 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NKX2-2O95096 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-2O95096 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.57■□□□□ 0.4
NKX2-2O95096 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-2O95096 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-2O95096 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-2O95096 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-2O95096 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NKX2-2O95096 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NKX2-2O95096 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-2O95096 AL355355.2-201ENST00000442321 338 ntBASIC17.57■□□□□ 0.4
NKX2-2O95096 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.57■□□□□ 0.4
NKX2-2O95096 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-2O95096 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-2O95096 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.57■□□□□ 0.4
NKX2-2O95096 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.57■□□□□ 0.4
NKX2-2O95096 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.57■□□□□ 0.4
NKX2-2O95096 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-2O95096 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.57■□□□□ 0.4
NKX2-2O95096 AC026471.5-201ENST00000615068 467 ntBASIC17.57■□□□□ 0.4
NKX2-2O95096 REXO1L10P-201ENST00000615707 1290 ntBASIC17.57■□□□□ 0.4
NKX2-2O95096 REXO1L12P-201ENST00000622156 912 ntBASIC17.57■□□□□ 0.4
NKX2-2O95096 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.57■□□□□ 0.4
NKX2-2O95096 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.57■□□□□ 0.4
NKX2-2O95096 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.57■□□□□ 0.4
NKX2-2O95096 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-2O95096 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-2O95096 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.57■□□□□ 0.4
NKX2-2O95096 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
NKX2-2O95096 AC093525.10-201ENST00000625130 1569 ntBASIC17.57■□□□□ 0.4
NKX2-2O95096 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
NKX2-2O95096 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.56■□□□□ 0.4
NKX2-2O95096 KRT8P3-201ENST00000519669 1449 ntBASIC17.56■□□□□ 0.4
NKX2-2O95096 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-2O95096 AC096733.2-201ENST00000609937 1394 ntBASIC17.56■□□□□ 0.4
NKX2-2O95096 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.56■□□□□ 0.4
NKX2-2O95096 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-2O95096 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-2O95096 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-2O95096 AC004408.2-201ENST00000623613 2777 ntBASIC17.56■□□□□ 0.4
NKX2-2O95096 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-2O95096 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NKX2-2O95096 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-2O95096 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NKX2-2O95096 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.56■□□□□ 0.4
NKX2-2O95096 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.56■□□□□ 0.4
NKX2-2O95096 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.56■□□□□ 0.4
NKX2-2O95096 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.56■□□□□ 0.4
NKX2-2O95096 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
NKX2-2O95096 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms