Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KDM4BO94953 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KDM4BO94953 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KDM4BO94953 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.71■□□□□ 0.27
KDM4BO94953 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KDM4BO94953 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
KDM4BO94953 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
KDM4BO94953 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
KDM4BO94953 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
KDM4BO94953 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
KDM4BO94953 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
KDM4BO94953 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.7■□□□□ 0.26
KDM4BO94953 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
KDM4BO94953 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.7■□□□□ 0.26
KDM4BO94953 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.7■□□□□ 0.26
KDM4BO94953 AC116351.2-201ENST00000606540 1585 ntBASIC16.7■□□□□ 0.26
KDM4BO94953 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.7■□□□□ 0.26
KDM4BO94953 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
KDM4BO94953 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.7■□□□□ 0.26
KDM4BO94953 MIR935-201ENST00000401179 91 ntBASIC16.7■□□□□ 0.26
KDM4BO94953 MIPEPP3-201ENST00000412105 444 ntBASIC16.7■□□□□ 0.26
KDM4BO94953 AC073210.2-201ENST00000430369 194 ntBASIC16.7■□□□□ 0.26
KDM4BO94953 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 AL121832.2-201ENST00000610979 668 ntBASIC16.7■□□□□ 0.26
KDM4BO94953 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.7■□□□□ 0.26
KDM4BO94953 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.7■□□□□ 0.26
KDM4BO94953 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
KDM4BO94953 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
KDM4BO94953 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM4BO94953 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KDM4BO94953 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM4BO94953 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM4BO94953 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM4BO94953 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM4BO94953 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
KDM4BO94953 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.69■□□□□ 0.26
KDM4BO94953 AC018553.1-201ENST00000616682 1458 ntBASIC16.69■□□□□ 0.26
KDM4BO94953 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM4BO94953 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KDM4BO94953 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KDM4BO94953 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM4BO94953 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.69■□□□□ 0.26
KDM4BO94953 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.69■□□□□ 0.26
KDM4BO94953 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.69■□□□□ 0.26
KDM4BO94953 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
KDM4BO94953 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM4BO94953 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.69■□□□□ 0.26
KDM4BO94953 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.69■□□□□ 0.26
KDM4BO94953 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
KDM4BO94953 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM4BO94953 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM4BO94953 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM4BO94953 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.69■□□□□ 0.26
KDM4BO94953 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
KDM4BO94953 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.69■□□□□ 0.26
KDM4BO94953 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.69■□□□□ 0.26
KDM4BO94953 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.69■□□□□ 0.26
KDM4BO94953 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM4BO94953 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.69■□□□□ 0.26
KDM4BO94953 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM4BO94953 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
KDM4BO94953 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.68■□□□□ 0.26
KDM4BO94953 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.68■□□□□ 0.26
KDM4BO94953 AC141586.3-201ENST00000562166 1838 ntBASIC16.68■□□□□ 0.26
KDM4BO94953 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
KDM4BO94953 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
KDM4BO94953 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
KDM4BO94953 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.68■□□□□ 0.26
KDM4BO94953 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM4BO94953 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM4BO94953 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM4BO94953 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM4BO94953 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM4BO94953 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM4BO94953 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM4BO94953 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
KDM4BO94953 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.68■□□□□ 0.26
KDM4BO94953 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
KDM4BO94953 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.68■□□□□ 0.26
KDM4BO94953 AL390719.1-204ENST00000412397 1219 ntBASIC16.68■□□□□ 0.26
KDM4BO94953 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
KDM4BO94953 AC006970.2-201ENST00000450065 779 ntBASIC16.68■□□□□ 0.26
KDM4BO94953 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms