Protein–RNA interactions for Protein: O75533

SF3B1, Splicing factor 3B subunit 1, humanhuman

Known RBP eCLIP

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1O75533 RASGRP4-204ENST00000454404 3116 ntTSL 1 (best) BASIC11.2□□□□□ -0.623e-6■■■■■ 137.9
SF3B1O75533 CHIC1-203ENST00000498318 2800 ntTSL 211.18□□□□□ -0.623e-6■■■■■ 137.9
SF3B1O75533 OPTN-201ENST00000263036 2464 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.623e-6■■■■■ 137.9
SF3B1O75533 SEPT9-234ENST00000590938 611 ntTSL 411.17□□□□□ -0.623e-6■■■■■ 137.9
SF3B1O75533 BCO2-213ENST00000531169 2493 ntTSL 1 (best) BASIC11.17□□□□□ -0.623e-6■■■■■ 137.9
SF3B1O75533 DCLRE1C-212ENST00000418843 901 ntTSL 511.16□□□□□ -0.623e-6■■■■■ 137.9
SF3B1O75533 ZNF57-202ENST00000522294 713 ntTSL 511.16□□□□□ -0.623e-6■■■■■ 137.9
SF3B1O75533 RHOH-202ENST00000503754 557 ntTSL 411.16□□□□□ -0.623e-6■■■■■ 137.9
SF3B1O75533 CPEB4-203ENST00000517880 1416 ntTSL 1 (best) BASIC11.16□□□□□ -0.623e-6■■■■■ 137.9
SF3B1O75533 GRAMD4-206ENST00000456069 669 ntTSL 311.13□□□□□ -0.632e-11■■■■■ 137.9
SF3B1O75533 EHMT2-211ENST00000480912 3940 ntTSL 511.13□□□□□ -0.633e-6■■■■■ 137.9
SF3B1O75533 PRKACA-202ENST00000350356 3105 ntTSL 211.11□□□□□ -0.633e-6■■■■■ 137.9
SF3B1O75533 PPIA-205ENST00000479021 552 ntTSL 411.11□□□□□ -0.633e-6■■■■■ 137.9
SF3B1O75533 MAP3K3-207ENST00000578622 560 ntTSL 411.11□□□□□ -0.632e-11■■■■■ 137.9
SF3B1O75533 GON4L-202ENST00000361040 5118 ntTSL 1 (best) BASIC11.11□□□□□ -0.633e-6■■■■■ 137.9
SF3B1O75533 IL4R-203ENST00000543915 3539 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.633e-6■■■■■ 137.9
SF3B1O75533 METTL2A-201ENST00000311506 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.633e-6■■■■■ 137.9
SF3B1O75533 BRD9-216ENST00000518251 546 ntTSL 411.09□□□□□ -0.633e-6■■■■■ 137.9
SF3B1O75533 DDOST-204ENST00000475210 328 ntTSL 211.09□□□□□ -0.633e-6■■■■■ 137.9
SF3B1O75533 ZNF197-202ENST00000344387 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.633e-6■■■■■ 137.9
SF3B1O75533 BARD1-210ENST00000613374 4096 ntTSL 1 (best) BASIC11.08□□□□□ -0.643e-6■■■■■ 137.9
SF3B1O75533 LPIN3-205ENST00000632009 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.643e-6■■■■■ 137.9
SF3B1O75533 AC006030.1-201ENST00000451608 5059 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.643e-6■■■■■ 137.9
SF3B1O75533 LANCL1-203ENST00000431941 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.643e-6■■■■■ 137.9
SF3B1O75533 ZNF197-201ENST00000334075 2320 ntTSL 1 (best)11.06□□□□□ -0.643e-6■■■■■ 137.9
SF3B1O75533 BARD1-211ENST00000613706 4153 ntTSL 1 (best) BASIC11.05□□□□□ -0.643e-6■■■■■ 137.9
SF3B1O75533 CHN2-202ENST00000409041 2375 ntTSL 1 (best) BASIC11.04□□□□□ -0.643e-6■■■■■ 137.9
SF3B1O75533 SUMF2-215ENST00000461912 529 ntTSL 411.04□□□□□ -0.643e-6■■■■■ 137.9
SF3B1O75533 FAM92A-218ENST00000523577 3003 ntTSL 511.04□□□□□ -0.643e-6■■■■■ 137.9
SF3B1O75533 WDR76-202ENST00000381246 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.643e-6■■■■■ 137.9
SF3B1O75533 PAX8-AS1-207ENST00000451179 1196 ntTSL 1 (best)11.02□□□□□ -0.653e-6■■■■■ 137.9
SF3B1O75533 EXOC1-203ENST00000381295 3551 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.653e-6■■■■■ 137.9
SF3B1O75533 ZFP36L1-204ENST00000555997 3094 ntTSL 3 BASIC11□□□□□ -0.653e-6■■■■■ 137.9
SF3B1O75533 AC004893.2-201ENST00000360902 3398 ntTSL 2 BASIC10.99□□□□□ -0.653e-6■■■■■ 137.9
SF3B1O75533 CWF19L1-206ENST00000478047 2694 ntTSL 210.98□□□□□ -0.653e-6■■■■■ 137.9
SF3B1O75533 MIATNB-205ENST00000440816 591 ntTSL 510.98□□□□□ -0.653e-6■■■■■ 137.9
SF3B1O75533 ZNF814-212ENST00000597807 771 ntTSL 2 BASIC10.98□□□□□ -0.653e-6■■■■■ 137.9
SF3B1O75533 RASGRP1-206ENST00000558164 1757 ntTSL 1 (best) BASIC10.98□□□□□ -0.653e-6■■■■■ 137.9
SF3B1O75533 GALE-214ENST00000481736 1801 ntTSL 210.97□□□□□ -0.653e-6■■■■■ 137.9
SF3B1O75533 PKNOX1-201ENST00000291547 5003 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.663e-6■■■■■ 137.9
SF3B1O75533 POLR3C-206ENST00000489436 820 ntTSL 310.95□□□□□ -0.663e-6■■■■■ 137.9
SF3B1O75533 ZNF433-201ENST00000344980 2280 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.663e-6■■■■■ 137.9
SF3B1O75533 TMCO1-201ENST00000367881 2224 ntTSL 1 (best) BASIC10.95□□□□□ -0.663e-6■■■■■ 137.9
SF3B1O75533 OPTN-206ENST00000378764 2498 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.663e-6■■■■■ 137.9
SF3B1O75533 MRPL58-202ENST00000580800 513 ntTSL 310.94□□□□□ -0.662e-11■■■■■ 137.9
SF3B1O75533 SP2-203ENST00000635868 342 ntTSL 510.93□□□□□ -0.663e-6■■■■■ 137.9
SF3B1O75533 DCAF12-201ENST00000361264 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.663e-6■■■■■ 137.9
SF3B1O75533 RHOH-201ENST00000381799 4305 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.663e-6■■■■■ 137.9
SF3B1O75533 CIB2-207ENST00000559645 462 ntTSL 310.92□□□□□ -0.663e-6■■■■■ 137.9
SF3B1O75533 FSCN3-202ENST00000421705 696 ntTSL 310.92□□□□□ -0.663e-6■■■■■ 137.9
SF3B1O75533 MAP2K1-203ENST00000566326 1432 ntTSL 5 BASIC10.92□□□□□ -0.663e-6■■■■■ 137.9
SF3B1O75533 TTC27-201ENST00000317907 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.663e-6■■■■■ 137.9
SF3B1O75533 TPP1-211ENST00000528917 559 ntTSL 410.9□□□□□ -0.663e-6■■■■■ 137.9
SF3B1O75533 HACL1-203ENST00000414979 569 ntTSL 410.9□□□□□ -0.663e-6■■■■■ 137.9
SF3B1O75533 FLNB-202ENST00000358537 9391 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.672e-6■■■■■ 137.9
SF3B1O75533 ALDH2-201ENST00000261733 9569 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.673e-6■■■■■ 137.9
SF3B1O75533 DNAJC7-219ENST00000590774 544 ntTSL 410.87□□□□□ -0.673e-6■■■■■ 137.9
SF3B1O75533 ARMCX5-GPRASP2-207ENST00000486740 689 ntTSL 310.87□□□□□ -0.673e-6■■■■■ 137.9
SF3B1O75533 AC022568.1-201ENST00000518222 833 ntTSL 4 BASIC10.87□□□□□ -0.673e-6■■■■■ 137.9
SF3B1O75533 TRAP1-206ENST00000571538 587 ntTSL 410.86□□□□□ -0.673e-6■■■■■ 137.9
SF3B1O75533 RPAP3-201ENST00000005386 4370 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.673e-6■■■■■ 137.9
SF3B1O75533 NBR1-206ENST00000590996 3446 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.673e-6■■■■■ 137.9
SF3B1O75533 LMBR1L-224ENST00000552141 756 ntTSL 210.84□□□□□ -0.673e-6■■■■■ 137.9
SF3B1O75533 MTMR9-204ENST00000530200 3503 ntTSL 1 (best)10.84□□□□□ -0.673e-6■■■■■ 137.9
SF3B1O75533 EPB41L2-218ENST00000527659 2436 ntTSL 5 BASIC10.83□□□□□ -0.683e-6■■■■■ 137.9
SF3B1O75533 CALU-206ENST00000542996 4225 ntTSL 1 (best) BASIC10.83□□□□□ -0.683e-6■■■■■ 137.9
SF3B1O75533 WDR33-202ENST00000393006 3574 ntTSL 1 (best) BASIC10.83□□□□□ -0.683e-6■■■■■ 137.9
SF3B1O75533 TNIP1-209ENST00000521001 575 ntTSL 410.83□□□□□ -0.683e-6■■■■■ 137.9
SF3B1O75533 RASGRP4-214ENST00000592322 3313 ntTSL 510.82□□□□□ -0.683e-6■■■■■ 137.9
SF3B1O75533 RASGRP4-219ENST00000618320 3313 ntTSL 2 BASIC10.82□□□□□ -0.683e-6■■■■■ 137.9
SF3B1O75533 SCG5-202ENST00000413748 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.683e-6■■■■■ 137.9
SF3B1O75533 VRK3-216ENST00000599342 795 ntTSL 310.81□□□□□ -0.683e-6■■■■■ 137.9
SF3B1O75533 ZNF131-202ENST00000499046 990 ntTSL 1 (best)10.81□□□□□ -0.682e-11■■■■■ 137.9
SF3B1O75533 NUMB-202ENST00000356296 3453 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.682e-6■■■■■ 137.9
SF3B1O75533 KCTD10-213ENST00000542262 554 ntTSL 410.77□□□□□ -0.693e-6■■■■■ 137.9
SF3B1O75533 TFCP2L1-201ENST00000263707 9292 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.693e-6■■■■■ 137.9
SF3B1O75533 GLA-201ENST00000218516 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.693e-6■■■■■ 137.9
SF3B1O75533 EXTL3-206ENST00000519886 803 ntTSL 310.75□□□□□ -0.693e-6■■■■■ 137.9
SF3B1O75533 PDCD6-209ENST00000512466 3763 ntTSL 210.74□□□□□ -0.693e-6■■■■■ 137.9
SF3B1O75533 ZNF664-201ENST00000337815 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.693e-6■■■■■ 137.9
SF3B1O75533 DCLRE1C-202ENST00000378241 833 ntTSL 510.74□□□□□ -0.693e-6■■■■■ 137.9
SF3B1O75533 DIABLO-212ENST00000489781 2146 ntTSL 210.73□□□□□ -0.692e-11■■■■■ 137.9
SF3B1O75533 KCTD10-204ENST00000535747 735 ntTSL 210.73□□□□□ -0.693e-6■■■■■ 137.9
SF3B1O75533 MIR6777-201ENST00000613934 66 ntBASIC10.73□□□□□ -0.693e-6■■■■■ 137.9
SF3B1O75533 ALAD-208ENST00000482847 3247 ntTSL 210.72□□□□□ -0.693e-6■■■■■ 137.9
SF3B1O75533 JAK1-202ENST00000465376 814 ntTSL 310.71□□□□□ -0.693e-6■■■■■ 137.9
SF3B1O75533 TMEM44-212ENST00000476750 946 ntTSL 310.71□□□□□ -0.691e-16■■■■■ 137.9
SF3B1O75533 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.73e-6■■■■■ 137.9
SF3B1O75533 FLNB-211ENST00000484981 932 ntTSL 510.7□□□□□ -0.72e-11■■■■■ 137.9
SF3B1O75533 HUWE1-206ENST00000463852 586 ntTSL 210.7□□□□□ -0.73e-6■■■■■ 137.9
SF3B1O75533 MVK-210ENST00000545516 522 ntTSL 310.69□□□□□ -0.73e-6■■■■■ 137.9
SF3B1O75533 PROCA1-209ENST00000581289 766 ntTSL 3 BASIC10.68□□□□□ -0.73e-6■■■■■ 137.9
SF3B1O75533 EXTL2-202ENST00000370114 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.73e-6■■■■■ 137.9
SF3B1O75533 SSH1-203ENST00000546433 5621 ntTSL 510.67□□□□□ -0.73e-6■■■■■ 137.9
SF3B1O75533 NDUFS4-201ENST00000296684 675 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.73e-6■■■■■ 137.9
SF3B1O75533 RHOH-205ENST00000504638 530 ntTSL 210.66□□□□□ -0.73e-6■■■■■ 137.9
SF3B1O75533 CCDC150-204ENST00000431807 3047 ntTSL 210.66□□□□□ -0.73e-6■■■■■ 137.9
SF3B1O75533 ACLY-205ENST00000588547 471 ntTSL 310.65□□□□□ -0.73e-6■■■■■ 137.9
SF3B1O75533 QKI-208ENST00000537041 583 ntTSL 510.65□□□□□ -0.72e-11■■■■■ 137.9
SF3B1O75533 RHOH-211ENST00000513894 571 ntTSL 410.64□□□□□ -0.713e-6■■■■■ 137.9
Retrieved 100 of 46,956 protein–RNA pairs in 1406.3 ms