RNA–Protein interactions for RNA: ENST00000263036.9

OPTN-201, Transcript of optineurin, humanhuman

APPRIS P2 TSL 2 BASIC

Gene OPTN, Length 2,464 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-201ENST00000263036 NISCHQ9Y2I1 1504 aa21.12■□□□□ 0.97
OPTN-201ENST00000263036 CHIC1Q5VXU3 224 aa19.51■□□□□ 0.71
OPTN-201ENST00000263036 AEBP2Q6ZN18 517 aaPredicted RBP19.08■□□□□ 0.64
OPTN-201ENST00000263036 SHROOM4Q9ULL8 1493 aa18.28■□□□□ 0.52
OPTN-201ENST00000263036 SUPT5HO00267 1087 aaKnown RBP18.14■□□□□ 0.5
OPTN-201ENST00000263036 HRCP23327 699 aa18.11■□□□□ 0.49
OPTN-201ENST00000263036 ZCCHC6Q5VYS8 1495 aaKnown RBP17.96■□□□□ 0.47
OPTN-201ENST00000263036 MYO15BQ96JP2 1530 aa17.92■□□□□ 0.46
OPTN-201ENST00000263036 PCGF6Q9BYE7 350 aa17.76■□□□□ 0.43
OPTN-201ENST00000263036 CCDC180Q9P1Z9 1646 aa17.71■□□□□ 0.43
OPTN-201ENST00000263036 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
OPTN-201ENST00000263036 PHF23Q9BUL5 403 aaPredicted RBP17.62■□□□□ 0.41
OPTN-201ENST00000263036 PPARGC1BQ86YN6 1023 aaKnown RBP17.6■□□□□ 0.41
OPTN-201ENST00000263036 TRIM26Q12899 539 aaPredicted RBP17.36■□□□□ 0.37
OPTN-201ENST00000263036 LOC105371045A0A1W2PR82 267 aa17.35■□□□□ 0.37
OPTN-201ENST00000263036 DCAF8L2P0C7V8 631 aa17.33■□□□□ 0.36
OPTN-201ENST00000263036 PELP1Q8IZL8 1130 aaKnown RBP17.21■□□□□ 0.34
OPTN-201ENST00000263036 ZEB1P37275 1124 aaPredicted RBP17.2■□□□□ 0.34
OPTN-201ENST00000263036 ABCC9O60706 1549 aa17.02■□□□□ 0.31
OPTN-201ENST00000263036 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
OPTN-201ENST00000263036 RSF1Q96T23 1441 aaPredicted RBP16.89■□□□□ 0.29
OPTN-201ENST00000263036 TRIM41Q8WV44 630 aa16.89■□□□□ 0.29
OPTN-201ENST00000263036 RB1CC1Q8TDY2 1594 aa16.77■□□□□ 0.27
OPTN-201ENST00000263036 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
OPTN-201ENST00000263036 EHMT2Q96KQ7 1210 aa16.67■□□□□ 0.26
OPTN-201ENST00000263036 SCRIBQ14160 1630 aa16.67■□□□□ 0.26
OPTN-201ENST00000263036 ACIN1Q9UKV3 1341 aaKnown RBP16.65■□□□□ 0.26
OPTN-201ENST00000263036 NEUROD1Q13562 356 aa16.56■□□□□ 0.24
OPTN-201ENST00000263036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.54■□□□□ 0.24
OPTN-201ENST00000263036 CCER1Q8TC90 406 aaPredicted RBP16.54■□□□□ 0.24
OPTN-201ENST00000263036 MYT1Q01538 1121 aa16.5■□□□□ 0.23
OPTN-201ENST00000263036 CENPBP07199 599 aaPredicted RBP16.49■□□□□ 0.23
OPTN-201ENST00000263036 DIEXFQ68CQ4 756 aaKnown RBP16.47■□□□□ 0.23
OPTN-201ENST00000263036 GTF3C3Q9Y5Q9 886 aa16.44■□□□□ 0.22
OPTN-201ENST00000263036 CECR2Q9BXF3 1484 aa16.43■□□□□ 0.22
OPTN-201ENST00000263036 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
OPTN-201ENST00000263036 WRNQ14191 1432 aaPredicted RBP eCLIP16.39■□□□□ 0.21
OPTN-201ENST00000263036 EIF4G1Q04637 1599 aaKnown RBP16.35■□□□□ 0.21
OPTN-201ENST00000263036 WIZO95785 1651 aa16.33■□□□□ 0.2
OPTN-201ENST00000263036 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
OPTN-201ENST00000263036 NACADO15069 1562 aa16.3■□□□□ 0.2
OPTN-201ENST00000263036 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
OPTN-201ENST00000263036 CEP162Q5TB80 1403 aa16.25■□□□□ 0.19
OPTN-201ENST00000263036 ZNF316A6NFI3 1004 aaPredicted RBP16.24■□□□□ 0.19
OPTN-201ENST00000263036 TNIKQ9UKE5 1360 aa16.21■□□□□ 0.19
OPTN-201ENST00000263036 CCDC88BA6NC98 1476 aa16.18■□□□□ 0.18
OPTN-201ENST00000263036 TTBK1Q5TCY1 1321 aaPredicted RBP16.15■□□□□ 0.18
OPTN-201ENST00000263036 EEA1Q15075 1411 aa16.13■□□□□ 0.17
OPTN-201ENST00000263036 ABCC8Q09428 1581 aa16.13■□□□□ 0.17
OPTN-201ENST00000263036 TOP2AP11388 1531 aaKnown RBP16.12■□□□□ 0.17
OPTN-201ENST00000263036 SOGA1O94964 1423 aa16.1■□□□□ 0.17
OPTN-201ENST00000263036 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
OPTN-201ENST00000263036 YTHDC1Q96MU7 727 aaKnown RBP16.06■□□□□ 0.16
OPTN-201ENST00000263036 KCNA4P22459 653 aa16.05■□□□□ 0.16
OPTN-201ENST00000263036 MIER1Q8N108 512 aa16.05■□□□□ 0.16
OPTN-201ENST00000263036 SMARCA2P51531 1590 aa16.03■□□□□ 0.16
OPTN-201ENST00000263036 GOLGA3Q08378 1498 aa16.02■□□□□ 0.16
OPTN-201ENST00000263036 UBTFP17480 764 aaKnown RBP16.02■□□□□ 0.15
OPTN-201ENST00000263036 RUSC2Q8N2Y8 1516 aa15.98■□□□□ 0.15
OPTN-201ENST00000263036 SMARCA4P51532 1647 aa15.97■□□□□ 0.15
OPTN-201ENST00000263036 HNRNPUL2Q1KMD3 747 aaKnown RBP15.91■□□□□ 0.14
OPTN-201ENST00000263036 CLSPNQ9HAW4 1339 aa15.89■□□□□ 0.13
OPTN-201ENST00000263036 CEP164Q9UPV0 1460 aa15.89■□□□□ 0.13
OPTN-201ENST00000263036 KIF21BO75037 1637 aa15.86■□□□□ 0.13
OPTN-201ENST00000263036 CLIP1P30622 1438 aa15.86■□□□□ 0.13
OPTN-201ENST00000263036 VPS8Q8N3P4 1428 aa15.86■□□□□ 0.13
OPTN-201ENST00000263036 UNC13AQ9UPW8 1703 aa15.86■□□□□ 0.13
OPTN-201ENST00000263036 SLC24A1O60721 1099 aa15.81■□□□□ 0.12
OPTN-201ENST00000263036 BAZ1BQ9UIG0 1483 aaKnown RBP15.79■□□□□ 0.12
OPTN-201ENST00000263036 APLP2Q06481 763 aa15.77■□□□□ 0.12
OPTN-201ENST00000263036 ADRA2BP18089 450 aa15.76■□□□□ 0.11
OPTN-201ENST00000263036 BICRAQ9NZM4 1560 aa15.76■□□□□ 0.11
OPTN-201ENST00000263036 SUPT16HQ9Y5B9 1047 aaKnown RBP15.75■□□□□ 0.11
OPTN-201ENST00000263036 SYNJ1O43426 1573 aa15.73■□□□□ 0.11
OPTN-201ENST00000263036 DHX57Q6P158 1386 aaKnown RBP15.72■□□□□ 0.11
OPTN-201ENST00000263036 RAPGEF2Q9Y4G8 1499 aa15.69■□□□□ 0.1
OPTN-201ENST00000263036 PEG3Q9GZU2 1588 aa15.67■□□□□ 0.1
OPTN-201ENST00000263036 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.097e-9■□□□□ 10
OPTN-201ENST00000263036 TSHZ2Q9NRE2 1034 aa15.62■□□□□ 0.09
OPTN-201ENST00000263036 CUX2O14529 1486 aa15.57■□□□□ 0.08
OPTN-201ENST00000263036 RRBP1Q9P2E9 1410 aaKnown RBP15.57■□□□□ 0.08
OPTN-201ENST00000263036 ANP32EQ9BTT0 268 aa15.56■□□□□ 0.08
OPTN-201ENST00000263036 ARAP1Q96P48 1450 aa15.54■□□□□ 0.08
OPTN-201ENST00000263036 ERICH3Q5RHP9 1530 aa15.54■□□□□ 0.08
OPTN-201ENST00000263036 RANGAP1P46060 587 aaPredicted RBP15.54■□□□□ 0.08
OPTN-201ENST00000263036 KANK4Q5T7N3 995 aaPredicted RBP15.51■□□□□ 0.07
OPTN-201ENST00000263036 PRXQ9BXM0 1461 aa15.51■□□□□ 0.07
OPTN-201ENST00000263036 TOP2BQ02880 1626 aa15.51■□□□□ 0.07
OPTN-201ENST00000263036 SENP3Q9H4L4 574 aaPredicted RBP15.5■□□□□ 0.07
OPTN-201ENST00000263036 ATAD2BQ9ULI0 1458 aa15.48■□□□□ 0.07
OPTN-201ENST00000263036 DNAJC5BQ9UF47 199 aa15.46■□□□□ 0.07
OPTN-201ENST00000263036 CCNB3Q8WWL7 1395 aa15.46■□□□□ 0.07
OPTN-201ENST00000263036 BIVM-ERCC5R4GMW8 1640 aa15.43■□□□□ 0.06
OPTN-201ENST00000263036 KCNH8Q96L42 1107 aa15.41■□□□□ 0.06
OPTN-201ENST00000263036 MAPKBP1O60336 1514 aa15.38■□□□□ 0.05
OPTN-201ENST00000263036 RAB3GAP2Q9H2M9 1393 aa15.37■□□□□ 0.05
OPTN-201ENST00000263036 FKBP8Q14318 412 aa15.35■□□□□ 0.05
OPTN-201ENST00000263036 ARHGAP35Q9NRY4 1499 aa15.34■□□□□ 0.05
OPTN-201ENST00000263036 BCANQ96GW7 911 aa15.34■□□□□ 0.05
OPTN-201ENST00000263036 KIF27Q86VH2 1401 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms