RNA–Protein interactions for RNA: ENST00000498318.1

CHIC1-203, Transcript of cysteine rich hydrophobic domain 1, humanhuman

TSL 2

Gene CHIC1, Length 2,800 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1-203ENST00000498318 NISCHQ9Y2I1 1504 aa22.43■■□□□ 1.18
CHIC1-203ENST00000498318 SHROOM4Q9ULL8 1493 aa19.62■□□□□ 0.73
CHIC1-203ENST00000498318 SUPT5HO00267 1087 aaKnown RBP19.26■□□□□ 0.67
CHIC1-203ENST00000498318 DCAF8L2P0C7V8 631 aa19.09■□□□□ 0.65
CHIC1-203ENST00000498318 ZCCHC6Q5VYS8 1495 aaKnown RBP18.94■□□□□ 0.62
CHIC1-203ENST00000498318 CCDC180Q9P1Z9 1646 aa18.84■□□□□ 0.61
CHIC1-203ENST00000498318 CHIC1Q5VXU3 224 aa18.58■□□□□ 0.56
CHIC1-203ENST00000498318 MYO15BQ96JP2 1530 aa18.55■□□□□ 0.56
CHIC1-203ENST00000498318 PCGF6Q9BYE7 350 aa18.22■□□□□ 0.51
CHIC1-203ENST00000498318 LOC105371045A0A1W2PR82 267 aa18.22■□□□□ 0.51
CHIC1-203ENST00000498318 DCAF1Q9Y4B6 1507 aa18.18■□□□□ 0.5
CHIC1-203ENST00000498318 HRCP23327 699 aa18.09■□□□□ 0.49
CHIC1-203ENST00000498318 SCRIBQ14160 1630 aa18■□□□□ 0.47
CHIC1-203ENST00000498318 PPARGC1BQ86YN6 1023 aaKnown RBP17.98■□□□□ 0.47
CHIC1-203ENST00000498318 EHMT2Q96KQ7 1210 aa17.9■□□□□ 0.46
CHIC1-203ENST00000498318 FAM9AQ8IZU1 332 aaPredicted RBP17.87■□□□□ 0.45
CHIC1-203ENST00000498318 ABCC9O60706 1549 aa17.87■□□□□ 0.45
CHIC1-203ENST00000498318 RSF1Q96T23 1441 aaPredicted RBP17.86■□□□□ 0.45
CHIC1-203ENST00000498318 TRIM41Q8WV44 630 aa17.79■□□□□ 0.44
CHIC1-203ENST00000498318 RB1CC1Q8TDY2 1594 aa17.72■□□□□ 0.43
CHIC1-203ENST00000498318 CECR2Q9BXF3 1484 aa17.67■□□□□ 0.42
CHIC1-203ENST00000498318 TRIM26Q12899 539 aaPredicted RBP17.65■□□□□ 0.42
CHIC1-203ENST00000498318 MROH2BQ7Z745 1585 aa17.55■□□□□ 0.4
CHIC1-203ENST00000498318 WIZO95785 1651 aa17.47■□□□□ 0.39
CHIC1-203ENST00000498318 NACADO15069 1562 aa17.47■□□□□ 0.39
CHIC1-203ENST00000498318 TTBK1Q5TCY1 1321 aaPredicted RBP17.29■□□□□ 0.36
CHIC1-203ENST00000498318 PABPN1Q86U42 306 aaKnown RBP eCLIP17.2■□□□□ 0.34
CHIC1-203ENST00000498318 BAZ1AQ9NRL2 1556 aaPredicted RBP17.19■□□□□ 0.34
CHIC1-203ENST00000498318 ABCC8Q09428 1581 aa17.19■□□□□ 0.34
CHIC1-203ENST00000498318 ZEB1P37275 1124 aaPredicted RBP17.16■□□□□ 0.34
CHIC1-203ENST00000498318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.16■□□□□ 0.34
CHIC1-203ENST00000498318 CCDC88BA6NC98 1476 aa17.12■□□□□ 0.33
CHIC1-203ENST00000498318 EIF4G1Q04637 1599 aaKnown RBP17.08■□□□□ 0.32
CHIC1-203ENST00000498318 SMARCA4P51532 1647 aa17.06■□□□□ 0.32
CHIC1-203ENST00000498318 UNC13AQ9UPW8 1703 aa17.05■□□□□ 0.32
CHIC1-203ENST00000498318 SOGA1O94964 1423 aa17.05■□□□□ 0.32
CHIC1-203ENST00000498318 TOP2AP11388 1531 aaKnown RBP17.04■□□□□ 0.32
CHIC1-203ENST00000498318 CCER1Q8TC90 406 aaPredicted RBP17.03■□□□□ 0.32
CHIC1-203ENST00000498318 SMARCA2P51531 1590 aa17.01■□□□□ 0.31
CHIC1-203ENST00000498318 UBTFP17480 764 aaKnown RBP17■□□□□ 0.31
CHIC1-203ENST00000498318 RUSC2Q8N2Y8 1516 aa17■□□□□ 0.31
CHIC1-203ENST00000498318 CEP162Q5TB80 1403 aa16.92■□□□□ 0.3
CHIC1-203ENST00000498318 CSRNP3Q8WYN3 585 aa16.92■□□□□ 0.3
CHIC1-203ENST00000498318 RANGAP1P46060 587 aaPredicted RBP16.88■□□□□ 0.29
CHIC1-203ENST00000498318 BICRAQ9NZM4 1560 aa16.83■□□□□ 0.28
CHIC1-203ENST00000498318 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
CHIC1-203ENST00000498318 TNIKQ9UKE5 1360 aa16.81■□□□□ 0.28
CHIC1-203ENST00000498318 WRNQ14191 1432 aaPredicted RBP eCLIP16.78■□□□□ 0.28
CHIC1-203ENST00000498318 HNRNPUL2Q1KMD3 747 aaKnown RBP16.73■□□□□ 0.27
CHIC1-203ENST00000498318 GOLGA3Q08378 1498 aa16.69■□□□□ 0.26
CHIC1-203ENST00000498318 SYNJ1O43426 1573 aa16.69■□□□□ 0.26
CHIC1-203ENST00000498318 DIEXFQ68CQ4 756 aaKnown RBP16.69■□□□□ 0.26
CHIC1-203ENST00000498318 EEA1Q15075 1411 aa16.67■□□□□ 0.26
CHIC1-203ENST00000498318 ATAD2BQ9ULI0 1458 aa16.65■□□□□ 0.26
CHIC1-203ENST00000498318 BAZ1BQ9UIG0 1483 aaKnown RBP16.63■□□□□ 0.25
CHIC1-203ENST00000498318 NEUROD1Q13562 356 aa16.63■□□□□ 0.25
CHIC1-203ENST00000498318 CLIP1P30622 1438 aa16.59■□□□□ 0.25
CHIC1-203ENST00000498318 PEG3Q9GZU2 1588 aa16.58■□□□□ 0.24
CHIC1-203ENST00000498318 RAPGEF2Q9Y4G8 1499 aa16.58■□□□□ 0.24
CHIC1-203ENST00000498318 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
CHIC1-203ENST00000498318 ACIN1Q9UKV3 1341 aaKnown RBP16.55■□□□□ 0.24
CHIC1-203ENST00000498318 APLP2Q06481 763 aa16.55■□□□□ 0.24
CHIC1-203ENST00000498318 YTHDC1Q96MU7 727 aaKnown RBP16.5■□□□□ 0.23
CHIC1-203ENST00000498318 ZNF316A6NFI3 1004 aaPredicted RBP16.49■□□□□ 0.23
CHIC1-203ENST00000498318 KIF21BO75037 1637 aa16.47■□□□□ 0.23
CHIC1-203ENST00000498318 GTF3C3Q9Y5Q9 886 aa16.46■□□□□ 0.23
CHIC1-203ENST00000498318 VPS8Q8N3P4 1428 aa16.46■□□□□ 0.23
CHIC1-203ENST00000498318 KANK4Q5T7N3 995 aaPredicted RBP16.39■□□□□ 0.21
CHIC1-203ENST00000498318 CENPBP07199 599 aaPredicted RBP16.39■□□□□ 0.21
CHIC1-203ENST00000498318 MIER1Q8N108 512 aa16.38■□□□□ 0.21
CHIC1-203ENST00000498318 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
CHIC1-203ENST00000498318 ITGAEP38570 1179 aa16.33■□□□□ 0.21
CHIC1-203ENST00000498318 CUX1P39880 1505 aa16.3■□□□□ 0.2
CHIC1-203ENST00000498318 ARAP1Q96P48 1450 aa16.28■□□□□ 0.2
CHIC1-203ENST00000498318 PRXQ9BXM0 1461 aa16.27■□□□□ 0.2
CHIC1-203ENST00000498318 BIVM-ERCC5R4GMW8 1640 aa16.26■□□□□ 0.19
CHIC1-203ENST00000498318 NCAPD3P42695 1498 aa16.24■□□□□ 0.19
CHIC1-203ENST00000498318 KIF27Q86VH2 1401 aa16.22■□□□□ 0.19
CHIC1-203ENST00000498318 PELP1Q8IZL8 1130 aaKnown RBP16.2■□□□□ 0.18
CHIC1-203ENST00000498318 DHX57Q6P158 1386 aaKnown RBP16.19■□□□□ 0.18
CHIC1-203ENST00000498318 ERICH3Q5RHP9 1530 aa16.18■□□□□ 0.18
CHIC1-203ENST00000498318 P3H3Q8IVL6 736 aa16.18■□□□□ 0.18
CHIC1-203ENST00000498318 HMGXB3Q12766 1538 aa16.17■□□□□ 0.18
CHIC1-203ENST00000498318 CFTRP13569 1480 aa16.16■□□□□ 0.18
CHIC1-203ENST00000498318 ATP1B4Q9UN42 357 aaPredicted RBP16.16■□□□□ 0.18
CHIC1-203ENST00000498318 CUX2O14529 1486 aa16.14■□□□□ 0.17
CHIC1-203ENST00000498318 ARHGAP35Q9NRY4 1499 aa16.14■□□□□ 0.17
CHIC1-203ENST00000498318 IGF1RP08069 1367 aa16.09■□□□□ 0.17
CHIC1-203ENST00000498318 CCNB3Q8WWL7 1395 aa16.07■□□□□ 0.16
CHIC1-203ENST00000498318 RRBP1Q9P2E9 1410 aaKnown RBP16.05■□□□□ 0.16
CHIC1-203ENST00000498318 CARMIL1Q5VZK9 1371 aa16.04■□□□□ 0.16
CHIC1-203ENST00000498318 FAM50AQ14320 339 aaKnown RBP16.04■□□□□ 0.16
CHIC1-203ENST00000498318 CADPSQ9ULU8 1353 aa16.02■□□□□ 0.16
CHIC1-203ENST00000498318 FGD5Q6ZNL6 1462 aa16.02■□□□□ 0.16
CHIC1-203ENST00000498318 RAB3GAP2Q9H2M9 1393 aa15.99■□□□□ 0.15
CHIC1-203ENST00000498318 CLSPNQ9HAW4 1339 aa15.99■□□□□ 0.15
CHIC1-203ENST00000498318 SIN3AQ96ST3 1273 aa15.98■□□□□ 0.15
CHIC1-203ENST00000498318 KCNH8Q96L42 1107 aa15.95■□□□□ 0.14
CHIC1-203ENST00000498318 PHLDB1Q86UU1 1377 aa15.95■□□□□ 0.14
CHIC1-203ENST00000498318 RAD54L2Q9Y4B4 1467 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms