Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LGR5O75473 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.16■□□□□ 0.98
LGR5O75473 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.16■□□□□ 0.98
LGR5O75473 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LGR5O75473 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LGR5O75473 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LGR5O75473 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LGR5O75473 KRT8P3-201ENST00000519669 1449 ntBASIC21.16■□□□□ 0.98
LGR5O75473 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.16■□□□□ 0.98
LGR5O75473 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.16■□□□□ 0.98
LGR5O75473 PCED1CP-201ENST00000419887 785 ntBASIC21.16■□□□□ 0.98
LGR5O75473 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LGR5O75473 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LGR5O75473 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LGR5O75473 KRT18P56-201ENST00000507275 550 ntBASIC21.16■□□□□ 0.98
LGR5O75473 FAM86EP-206ENST00000510506 987 ntBASIC21.16■□□□□ 0.98
LGR5O75473 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.16■□□□□ 0.98
LGR5O75473 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LGR5O75473 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LGR5O75473 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LGR5O75473 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.15■□□□□ 0.98
LGR5O75473 GPAT2P1-201ENST00000444924 1672 ntBASIC21.15■□□□□ 0.98
LGR5O75473 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LGR5O75473 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LGR5O75473 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LGR5O75473 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LGR5O75473 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LGR5O75473 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LGR5O75473 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LGR5O75473 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LGR5O75473 AP000523.1-201ENST00000398242 1049 ntBASIC21.15■□□□□ 0.98
LGR5O75473 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LGR5O75473 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LGR5O75473 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.15■□□□□ 0.98
LGR5O75473 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
LGR5O75473 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.15■□□□□ 0.98
LGR5O75473 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.15■□□□□ 0.98
LGR5O75473 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.15■□□□□ 0.98
LGR5O75473 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
LGR5O75473 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LGR5O75473 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.15■□□□□ 0.98
LGR5O75473 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.14■□□□□ 0.98
LGR5O75473 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
LGR5O75473 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.14■□□□□ 0.98
LGR5O75473 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LGR5O75473 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LGR5O75473 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LGR5O75473 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LGR5O75473 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
LGR5O75473 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LGR5O75473 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
LGR5O75473 AL023284.2-201ENST00000405850 579 ntBASIC21.14■□□□□ 0.97
LGR5O75473 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LGR5O75473 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC21.14■□□□□ 0.97
LGR5O75473 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.14■□□□□ 0.97
LGR5O75473 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.14■□□□□ 0.97
LGR5O75473 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.14■□□□□ 0.97
LGR5O75473 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LGR5O75473 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LGR5O75473 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LGR5O75473 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LGR5O75473 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LGR5O75473 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.14■□□□□ 0.97
LGR5O75473 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LGR5O75473 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LGR5O75473 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.14■□□□□ 0.97
LGR5O75473 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LGR5O75473 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LGR5O75473 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGR5O75473 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
LGR5O75473 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGR5O75473 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGR5O75473 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGR5O75473 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGR5O75473 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGR5O75473 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.13■□□□□ 0.97
LGR5O75473 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGR5O75473 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LGR5O75473 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.13■□□□□ 0.97
LGR5O75473 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.13■□□□□ 0.97
LGR5O75473 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGR5O75473 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.13■□□□□ 0.97
LGR5O75473 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.13■□□□□ 0.97
LGR5O75473 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.13■□□□□ 0.97
LGR5O75473 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.13■□□□□ 0.97
LGR5O75473 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LGR5O75473 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
LGR5O75473 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.13■□□□□ 0.97
LGR5O75473 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGR5O75473 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.13■□□□□ 0.97
LGR5O75473 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGR5O75473 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LGR5O75473 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
LGR5O75473 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LGR5O75473 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LGR5O75473 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
LGR5O75473 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LGR5O75473 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
LGR5O75473 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LGR5O75473 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms