Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CDH16O75309 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH16O75309 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CDH16O75309 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDH16O75309 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH16O75309 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH16O75309 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH16O75309 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH16O75309 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CDH16O75309 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH16O75309 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH16O75309 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH16O75309 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH16O75309 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.25■□□□□ 0.67
CDH16O75309 AC005829.2-201ENST00000571422 1056 ntBASIC19.25■□□□□ 0.67
CDH16O75309 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH16O75309 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.25■□□□□ 0.67
CDH16O75309 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CDH16O75309 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CDH16O75309 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH16O75309 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDH16O75309 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH16O75309 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH16O75309 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH16O75309 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH16O75309 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH16O75309 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH16O75309 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH16O75309 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH16O75309 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH16O75309 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDH16O75309 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH16O75309 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH16O75309 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH16O75309 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH16O75309 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.24■□□□□ 0.67
CDH16O75309 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH16O75309 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH16O75309 AC004911.1-201ENST00000416316 871 ntBASIC19.24■□□□□ 0.67
CDH16O75309 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.24■□□□□ 0.67
CDH16O75309 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH16O75309 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH16O75309 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH16O75309 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.24■□□□□ 0.67
CDH16O75309 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH16O75309 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDH16O75309 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH16O75309 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH16O75309 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH16O75309 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH16O75309 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH16O75309 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CDH16O75309 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH16O75309 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH16O75309 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDH16O75309 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH16O75309 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH16O75309 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH16O75309 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDH16O75309 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH16O75309 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH16O75309 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CDH16O75309 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH16O75309 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDH16O75309 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH16O75309 AP006587.1-201ENST00000534129 1502 ntBASIC19.23■□□□□ 0.67
CDH16O75309 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH16O75309 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH16O75309 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH16O75309 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH16O75309 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH16O75309 AL162741.1-201ENST00000565563 1558 ntBASIC19.23■□□□□ 0.67
CDH16O75309 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CDH16O75309 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH16O75309 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CDH16O75309 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH16O75309 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDH16O75309 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.22■□□□□ 0.67
CDH16O75309 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH16O75309 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH16O75309 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
CDH16O75309 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.22■□□□□ 0.67
CDH16O75309 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH16O75309 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.22■□□□□ 0.67
CDH16O75309 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.22■□□□□ 0.67
CDH16O75309 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.22■□□□□ 0.67
CDH16O75309 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH16O75309 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH16O75309 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH16O75309 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH16O75309 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH16O75309 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDH16O75309 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDH16O75309 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CDH16O75309 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDH16O75309 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDH16O75309 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms