Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.64■■□□□ 1.06
CCNT1O60563 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CCNT1O60563 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.64■■□□□ 1.06
CCNT1O60563 AC096733.2-201ENST00000609937 1394 ntBASIC21.64■■□□□ 1.06
CCNT1O60563 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNT1O60563 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNT1O60563 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.64■■□□□ 1.05
CCNT1O60563 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.64■■□□□ 1.05
CCNT1O60563 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNT1O60563 MFAP1P1-201ENST00000442257 1255 ntBASIC21.64■■□□□ 1.05
CCNT1O60563 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.64■■□□□ 1.05
CCNT1O60563 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.64■■□□□ 1.05
CCNT1O60563 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCNT1O60563 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNT1O60563 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCNT1O60563 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNT1O60563 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCNT1O60563 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNT1O60563 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CCNT1O60563 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.64■■□□□ 1.05
CCNT1O60563 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNT1O60563 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
CCNT1O60563 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNT1O60563 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CCNT1O60563 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.63■■□□□ 1.05
CCNT1O60563 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNT1O60563 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNT1O60563 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNT1O60563 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNT1O60563 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCNT1O60563 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNT1O60563 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNT1O60563 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNT1O60563 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.63■■□□□ 1.05
CCNT1O60563 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCNT1O60563 AL390955.1-201ENST00000428694 934 ntBASIC21.63■■□□□ 1.05
CCNT1O60563 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCNT1O60563 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCNT1O60563 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CCNT1O60563 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNT1O60563 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNT1O60563 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNT1O60563 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CCNT1O60563 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CCNT1O60563 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCNT1O60563 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.63■■□□□ 1.05
CCNT1O60563 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.63■■□□□ 1.05
CCNT1O60563 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNT1O60563 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCNT1O60563 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNT1O60563 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCNT1O60563 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNT1O60563 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNT1O60563 AC120498.9-201ENST00000339021 3867 ntBASIC21.62■■□□□ 1.05
CCNT1O60563 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNT1O60563 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNT1O60563 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNT1O60563 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNT1O60563 MIR1238-201ENST00000408483 83 ntBASIC21.62■■□□□ 1.05
CCNT1O60563 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCNT1O60563 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.62■■□□□ 1.05
CCNT1O60563 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNT1O60563 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.62■■□□□ 1.05
CCNT1O60563 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNT1O60563 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.62■■□□□ 1.05
CCNT1O60563 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.62■■□□□ 1.05
CCNT1O60563 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCNT1O60563 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CCNT1O60563 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNT1O60563 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CCNT1O60563 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNT1O60563 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNT1O60563 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNT1O60563 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.61■■□□□ 1.05
CCNT1O60563 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.61■■□□□ 1.05
CCNT1O60563 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNT1O60563 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNT1O60563 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.61■■□□□ 1.05
CCNT1O60563 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CCNT1O60563 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNT1O60563 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNT1O60563 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNT1O60563 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.61■■□□□ 1.05
CCNT1O60563 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.61■■□□□ 1.05
CCNT1O60563 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNT1O60563 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNT1O60563 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.61■■□□□ 1.05
CCNT1O60563 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNT1O60563 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CCNT1O60563 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CCNT1O60563 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNT1O60563 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNT1O60563 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNT1O60563 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNT1O60563 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNT1O60563 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCNT1O60563 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.6■■□□□ 1.05
CCNT1O60563 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.6■■□□□ 1.05
CCNT1O60563 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNT1O60563 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms