Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.32■□□□□ 0.84
O00370 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.32■□□□□ 0.84
O00370 MIR4785-201ENST00000585005 73 ntBASIC20.32■□□□□ 0.84
O00370 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
O00370 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.32■□□□□ 0.84
O00370 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
O00370 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
O00370 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
O00370 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.32■□□□□ 0.84
O00370 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
O00370 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
O00370 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
O00370 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
O00370 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
O00370 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
O00370 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
O00370 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
O00370 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
O00370 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
O00370 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.31■□□□□ 0.84
O00370 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.31■□□□□ 0.84
O00370 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.31■□□□□ 0.84
O00370 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.31■□□□□ 0.84
O00370 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.31■□□□□ 0.84
O00370 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
O00370 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.31■□□□□ 0.84
O00370 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
O00370 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
O00370 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
O00370 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
O00370 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.31■□□□□ 0.84
O00370 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
O00370 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.3■□□□□ 0.84
O00370 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
O00370 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
O00370 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
O00370 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
O00370 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.3■□□□□ 0.84
O00370 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
O00370 KRT8P11-201ENST00000409686 1436 ntBASIC20.3■□□□□ 0.84
O00370 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.3■□□□□ 0.84
O00370 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
O00370 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
O00370 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.3■□□□□ 0.84
O00370 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.3■□□□□ 0.84
O00370 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
O00370 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
O00370 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
O00370 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
O00370 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
O00370 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
O00370 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
O00370 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
O00370 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.29■□□□□ 0.84
O00370 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
O00370 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.29■□□□□ 0.84
O00370 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.29■□□□□ 0.84
O00370 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.29■□□□□ 0.84
O00370 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
O00370 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
O00370 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
O00370 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.29■□□□□ 0.84
O00370 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
O00370 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
O00370 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
O00370 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.29■□□□□ 0.84
O00370 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.29■□□□□ 0.84
O00370 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
O00370 AP000692.2-201ENST00000608391 879 ntBASIC20.29■□□□□ 0.84
O00370 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
O00370 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
O00370 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.29■□□□□ 0.84
O00370 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
O00370 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
O00370 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
O00370 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.29■□□□□ 0.84
O00370 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.29■□□□□ 0.84
O00370 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
O00370 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
O00370 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
O00370 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
O00370 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
O00370 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
O00370 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
O00370 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.28■□□□□ 0.84
O00370 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.28■□□□□ 0.84
O00370 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
O00370 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
O00370 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
O00370 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
O00370 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
O00370 AC093503.3-201ENST00000624917 2352 ntBASIC20.28■□□□□ 0.84
O00370 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
O00370 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.28■□□□□ 0.84
O00370 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.28■□□□□ 0.84
O00370 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
O00370 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
O00370 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
O00370 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
O00370 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms