Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMKR1H3BMG3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMKR1H3BMG3 AL591742.1-201ENST00000604433 565 ntBASIC13.94□□□□□ -0.18
SMKR1H3BMG3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMKR1H3BMG3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.94□□□□□ -0.18
SMKR1H3BMG3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMKR1H3BMG3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC13.94□□□□□ -0.18
SMKR1H3BMG3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMKR1H3BMG3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SMKR1H3BMG3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMKR1H3BMG3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMKR1H3BMG3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMKR1H3BMG3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 HR-201ENST00000312841 5351 ntTSL 5 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 ANO7L1-203ENST00000602586 1720 ntBASIC13.93□□□□□ -0.18
SMKR1H3BMG3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 AC027612.3-201ENST00000413684 1047 ntBASIC13.93□□□□□ -0.18
SMKR1H3BMG3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.93□□□□□ -0.18
SMKR1H3BMG3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMKR1H3BMG3 SDHAP1-207ENST00000440850 2000 ntBASIC13.91□□□□□ -0.18
SMKR1H3BMG3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMKR1H3BMG3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMKR1H3BMG3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMKR1H3BMG3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMKR1H3BMG3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
SMKR1H3BMG3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
SMKR1H3BMG3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms