Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.51■□□□□ 0.07
LINC00473A8K010 TSPY21P-201ENST00000433481 731 ntBASIC15.51■□□□□ 0.07
LINC00473A8K010 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.51■□□□□ 0.07
LINC00473A8K010 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 AP003097.1-201ENST00000530657 1135 ntBASIC15.51■□□□□ 0.07
LINC00473A8K010 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.51■□□□□ 0.07
LINC00473A8K010 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 AC004264.1-201ENST00000608354 794 ntBASIC15.51■□□□□ 0.07
LINC00473A8K010 AC090164.3-201ENST00000610780 2143 ntBASIC15.51■□□□□ 0.07
LINC00473A8K010 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.51■□□□□ 0.07
LINC00473A8K010 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.51■□□□□ 0.07
LINC00473A8K010 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.51■□□□□ 0.07
LINC00473A8K010 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00473A8K010 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LINC00473A8K010 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00473A8K010 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.5■□□□□ 0.07
LINC00473A8K010 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00473A8K010 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
LINC00473A8K010 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00473A8K010 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC00473A8K010 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00473A8K010 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00473A8K010 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00473A8K010 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00473A8K010 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC00473A8K010 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
LINC00473A8K010 RNA5SP413-201ENST00000516373 109 ntBASIC15.5■□□□□ 0.07
LINC00473A8K010 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00473A8K010 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.5■□□□□ 0.07
LINC00473A8K010 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.5■□□□□ 0.07
LINC00473A8K010 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC00473A8K010 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00473A8K010 AC233263.1-201ENST00000578059 224 ntBASIC15.5■□□□□ 0.07
LINC00473A8K010 MTDHP1-201ENST00000605323 784 ntBASIC15.5■□□□□ 0.07
LINC00473A8K010 AC069544.1-201ENST00000609399 999 ntBASIC15.5■□□□□ 0.07
LINC00473A8K010 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.5■□□□□ 0.07
LINC00473A8K010 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC00473A8K010 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC00473A8K010 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC00473A8K010 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00473A8K010 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00473A8K010 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00473A8K010 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
LINC00473A8K010 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
LINC00473A8K010 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00473A8K010 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00473A8K010 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00473A8K010 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
LINC00473A8K010 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC00473A8K010 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
LINC00473A8K010 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LINC00473A8K010 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00473A8K010 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LINC00473A8K010 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
LINC00473A8K010 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
LINC00473A8K010 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00473A8K010 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00473A8K010 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC00473A8K010 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00473A8K010 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.49■□□□□ 0.07
LINC00473A8K010 ANO7L1-203ENST00000602586 1720 ntBASIC15.49■□□□□ 0.07
LINC00473A8K010 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LINC00473A8K010 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00473A8K010 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00473A8K010 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LINC00473A8K010 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00473A8K010 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC00473A8K010 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LINC00473A8K010 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00473A8K010 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00473A8K010 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00473A8K010 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LINC00473A8K010 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00473A8K010 KRT17P3-201ENST00000420566 1262 ntBASIC15.49■□□□□ 0.07
LINC00473A8K010 TSPY23P-201ENST00000440136 739 ntBASIC15.49■□□□□ 0.07
LINC00473A8K010 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
LINC00473A8K010 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00473A8K010 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00473A8K010 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC00473A8K010 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC00473A8K010 AC083906.6-201ENST00000641366 219 ntBASIC15.49■□□□□ 0.07
LINC00473A8K010 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LINC00473A8K010 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
LINC00473A8K010 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms