Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.34■□□□□ 0.05
SRRM4A7MD48 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM4A7MD48 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM4A7MD48 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SRRM4A7MD48 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM4A7MD48 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM4A7MD48 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM4A7MD48 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM4A7MD48 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SRRM4A7MD48 AL031598.1-201ENST00000561511 1773 ntBASIC15.34■□□□□ 0.05
SRRM4A7MD48 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.33■□□□□ 0.05
SRRM4A7MD48 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.33■□□□□ 0.05
SRRM4A7MD48 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SRRM4A7MD48 NEFHP1-201ENST00000412845 2629 ntBASIC15.33■□□□□ 0.05
SRRM4A7MD48 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
SRRM4A7MD48 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SRRM4A7MD48 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SRRM4A7MD48 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SRRM4A7MD48 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM4A7MD48 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.33■□□□□ 0.04
SRRM4A7MD48 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM4A7MD48 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM4A7MD48 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM4A7MD48 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM4A7MD48 TSPY21P-201ENST00000433481 731 ntBASIC15.33■□□□□ 0.04
SRRM4A7MD48 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.33■□□□□ 0.04
SRRM4A7MD48 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.33■□□□□ 0.04
SRRM4A7MD48 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.33■□□□□ 0.04
SRRM4A7MD48 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.33■□□□□ 0.04
SRRM4A7MD48 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM4A7MD48 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.33■□□□□ 0.04
SRRM4A7MD48 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM4A7MD48 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.33■□□□□ 0.04
SRRM4A7MD48 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM4A7MD48 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM4A7MD48 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
SRRM4A7MD48 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM4A7MD48 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM4A7MD48 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM4A7MD48 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SRRM4A7MD48 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.33■□□□□ 0.04
SRRM4A7MD48 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.33■□□□□ 0.04
SRRM4A7MD48 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.33■□□□□ 0.04
SRRM4A7MD48 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM4A7MD48 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM4A7MD48 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
SRRM4A7MD48 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.33■□□□□ 0.04
SRRM4A7MD48 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM4A7MD48 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SRRM4A7MD48 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM4A7MD48 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM4A7MD48 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM4A7MD48 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM4A7MD48 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM4A7MD48 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM4A7MD48 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM4A7MD48 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 Z85996.1-201ENST00000494644 937 ntBASIC15.32■□□□□ 0.04
SRRM4A7MD48 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM4A7MD48 AC104581.1-202ENST00000635932 2618 ntBASIC15.32■□□□□ 0.04
SRRM4A7MD48 AL512353.2-201ENST00000448759 1962 ntBASIC15.32■□□□□ 0.04
SRRM4A7MD48 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM4A7MD48 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM4A7MD48 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM4A7MD48 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM4A7MD48 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SRRM4A7MD48 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM4A7MD48 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM4A7MD48 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM4A7MD48 AC093525.10-201ENST00000625130 1569 ntBASIC15.32■□□□□ 0.04
SRRM4A7MD48 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
SRRM4A7MD48 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.31■□□□□ 0.04
SRRM4A7MD48 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.31■□□□□ 0.04
SRRM4A7MD48 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM4A7MD48 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM4A7MD48 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM4A7MD48 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM4A7MD48 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.31■□□□□ 0.04
SRRM4A7MD48 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM4A7MD48 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.31■□□□□ 0.04
SRRM4A7MD48 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM4A7MD48 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM4A7MD48 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM4A7MD48 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms