Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.29□□□□□ -0.28
TRAV13-1A0A0B4J241 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 LSM12P1-201ENST00000411836 588 ntBASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 AC007322.1-201ENST00000426983 750 ntBASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 PLD4-205ENST00000553861 667 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 KRT17P1-201ENST00000399211 1546 ntBASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV13-1A0A0B4J241 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAV13-1A0A0B4J241 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
TRAV13-1A0A0B4J241 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV13-1A0A0B4J241 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV13-1A0A0B4J241 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
TRAV13-1A0A0B4J241 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
TRAV13-1A0A0B4J241 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAV13-1A0A0B4J241 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.27□□□□□ -0.28
TRAV13-1A0A0B4J241 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV13-1A0A0B4J241 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAV13-1A0A0B4J241 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV13-1A0A0B4J241 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAV13-1A0A0B4J241 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.27□□□□□ -0.28
TRAV13-1A0A0B4J241 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 BID-214ENST00000617586 542 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 OR10C1-204ENST00000622521 1039 ntBASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 AC231657.2-201ENST00000624556 255 ntBASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 MOK-233ENST00000524214 1539 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 AC106820.2-201ENST00000563775 3264 ntBASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 ZNF815P-204ENST00000434898 1737 ntBASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV13-1A0A0B4J241 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms