Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 KRT18P11-201ENST00000435214 1283 ntBASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 AC139713.2-201ENST00000641328 2723 ntBASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
IGKV2-28A0A075B6P5 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 MKRN4P-201ENST00000444706 1521 ntBASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 UQCRFS1P1-201ENST00000435169 820 ntBASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGKV2-28A0A075B6P5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
IGKV2-28A0A075B6P5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
IGKV2-28A0A075B6P5 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
IGKV2-28A0A075B6P5 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
IGKV2-28A0A075B6P5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC12.58□□□□□ -0.4
IGKV2-28A0A075B6P5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
IGKV2-28A0A075B6P5 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
IGKV2-28A0A075B6P5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms