Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RNU6-668P-201ENST00000364180 107 ntBASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 TNNT3-205ENST00000381563 844 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 SNORA68-201ENST00000384437 133 ntBASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 TNNT3-209ENST00000397304 720 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 TDGF1P4-201ENST00000401555 520 ntBASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 RNA5SP129-201ENST00000410276 118 ntBASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 RNA5SP251-201ENST00000410614 137 ntBASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 AC009969.1-201ENST00000438726 172 ntBASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 RPL23AP6-201ENST00000446637 472 ntBASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 RN7SL798P-201ENST00000468562 301 ntBASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 IGLVI-68-201ENST00000519525 345 ntBASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 AL110118.1-201ENST00000553543 400 ntBASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 AC009962.1-201ENST00000567327 3813 ntBASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 MIR3714-201ENST00000579507 65 ntBASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 MIR7162-201ENST00000611134 69 ntBASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 MIR7156-201ENST00000620979 60 ntBASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 AC245060.6-201ENST00000624350 8420 ntBASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 ATM-215ENST00000530958 5718 ntTSL 2 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 WWP1P1-201ENST00000466609 2769 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 RNU6-1312P-201ENST00000362425 108 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 SNORA73B-201ENST00000363217 204 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 RNU6-833P-201ENST00000363486 107 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 SNORA10B-201ENST00000384458 133 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 U3.34-201ENST00000408198 212 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 RN7SKP119-201ENST00000410753 273 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 RN7SKP30-201ENST00000411373 334 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 ATP5A1P2-201ENST00000412323 255 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 RPL10P5-201ENST00000427719 639 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 STAG3L5P-204ENST00000443759 179 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 RNA5SP310-201ENST00000459084 116 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 RN7SL153P-201ENST00000486501 292 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 RNU6-122P-201ENST00000516818 107 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 AC005230.1-201ENST00000555418 285 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 IGHV1OR15-4-201ENST00000560037 348 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 BMF-210ENST00000561360 735 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 DNM1P34-202ENST00000567850 315 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 LZTS1-204ENST00000616228 231 ntTSL 2 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 CU638689.2-201ENST00000623809 818 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 AC134981.1-201ENST00000628076 348 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 ZNF209P-201ENST00000593450 2304 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 AC008124.1-201ENST00000609803 9730 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 AL731556.1-201ENST00000394628 3711 ntBASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.73□□□□□ -1.81
KRTAP3-3Q9BYR6 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms