RNA–Protein interactions for RNA: ENST00000317552.8

MID1-201, Transcript of midline 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MID1, Length 6,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MID1-201ENST00000317552 DCAF8L2P0C7V8 631 aa14.63□□□□□ -0.07
MID1-201ENST00000317552 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
MID1-201ENST00000317552 NISCHQ9Y2I1 1504 aa13.75□□□□□ -0.21
MID1-201ENST00000317552 SUPT5HO00267 1087 aaKnown RBP13.73□□□□□ -0.21
MID1-201ENST00000317552 FAM9AQ8IZU1 332 aaPredicted RBP13.71□□□□□ -0.22
MID1-201ENST00000317552 APLP2Q06481 763 aa13.64□□□□□ -0.23
MID1-201ENST00000317552 CCER1Q8TC90 406 aaPredicted RBP13.43□□□□□ -0.26
MID1-201ENST00000317552 ERICH6Q7L0X2 663 aa13.39□□□□□ -0.27
MID1-201ENST00000317552 EHMT2Q96KQ7 1210 aa13.39□□□□□ -0.27
MID1-201ENST00000317552 SHROOM4Q9ULL8 1493 aa13.31□□□□□ -0.28
MID1-201ENST00000317552 CENPBP07199 599 aaPredicted RBP13.17□□□□□ -0.3
MID1-201ENST00000317552 ZEB1P37275 1124 aaPredicted RBP13.08□□□□□ -0.31
MID1-201ENST00000317552 NEFLP07196 543 aa13.04□□□□□ -0.32
MID1-201ENST00000317552 ATP1B4Q9UN42 357 aaPredicted RBP12.99□□□□□ -0.33
MID1-201ENST00000317552 TTBK1Q5TCY1 1321 aaPredicted RBP12.99□□□□□ -0.33
MID1-201ENST00000317552 PCGF6Q9BYE7 350 aa12.96□□□□□ -0.33
MID1-201ENST00000317552 MYT1Q01538 1121 aa12.95□□□□□ -0.34
MID1-201ENST00000317552 RANGAP1P46060 587 aaPredicted RBP12.89□□□□□ -0.35
MID1-201ENST00000317552 DAXXQ9UER7 740 aaPredicted RBP12.83□□□□□ -0.36
MID1-201ENST00000317552 TRIM41Q8WV44 630 aa12.82□□□□□ -0.36
MID1-201ENST00000317552 UBTFP17480 764 aaKnown RBP12.79□□□□□ -0.36
MID1-201ENST00000317552 YTHDC1Q96MU7 727 aaKnown RBP12.75□□□□□ -0.37
MID1-201ENST00000317552 MYT1LQ9UL68 1186 aa12.7□□□□□ -0.38
MID1-201ENST00000317552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.55□□□□□ -0.4
MID1-201ENST00000317552 HNRNPUL2Q1KMD3 747 aaKnown RBP12.55□□□□□ -0.4
MID1-201ENST00000317552 POLR3GLQ9BT43 218 aa12.53□□□□□ -0.4
MID1-201ENST00000317552 ZNF316A6NFI3 1004 aaPredicted RBP12.48□□□□□ -0.41
MID1-201ENST00000317552 SLC4A1APQ9BWU0 796 aaKnown RBP12.44□□□□□ -0.42
MID1-201ENST00000317552 RTL5Q5HYW3 569 aaPredicted RBP12.41□□□□□ -0.42
MID1-201ENST00000317552 CLSPNQ9HAW4 1339 aa12.41□□□□□ -0.42
MID1-201ENST00000317552 TRIM26Q12899 539 aaPredicted RBP12.39□□□□□ -0.43
MID1-201ENST00000317552 ITGAEP38570 1179 aa12.37□□□□□ -0.43
MID1-201ENST00000317552 CHIC1Q5VXU3 224 aa12.33□□□□□ -0.44
MID1-201ENST00000317552 ZBTB47Q9UFB7 747 aaPredicted RBP12.31□□□□□ -0.44
MID1-201ENST00000317552 PPARGC1BQ86YN6 1023 aaKnown RBP12.27□□□□□ -0.44
MID1-201ENST00000317552 CNGB1Q14028 1251 aaPredicted RBP12.24□□□□□ -0.45
MID1-201ENST00000317552 HRCP23327 699 aa12.19□□□□□ -0.46
MID1-201ENST00000317552 NEFMP07197 916 aa12.14□□□□□ -0.47
MID1-201ENST00000317552 TRIM52Q96A61 297 aa12.14□□□□□ -0.47
MID1-201ENST00000317552 FAM50AQ14320 339 aaKnown RBP12.11□□□□□ -0.47
MID1-201ENST00000317552 CANXP27824 592 aaKnown RBP12.08□□□□□ -0.48
MID1-201ENST00000317552 SLC24A1O60721 1099 aa12.06□□□□□ -0.48
MID1-201ENST00000317552 CDK11AQ9UQ88 783 aaPredicted RBP12.05□□□□□ -0.48
MID1-201ENST00000317552 ANP32CO43423 234 aa12.04□□□□□ -0.48
MID1-201ENST00000317552 DIEXFQ68CQ4 756 aaKnown RBP12.02□□□□□ -0.49
MID1-201ENST00000317552 BCANQ96GW7 911 aa12.01□□□□□ -0.49
MID1-201ENST00000317552 NEUROD1Q13562 356 aa11.96□□□□□ -0.49
MID1-201ENST00000317552 ZNF326Q5BKZ1 582 aaKnown RBP11.96□□□□□ -0.5
MID1-201ENST00000317552 ANP32BQ92688 251 aaKnown RBP11.95□□□□□ -0.5
MID1-201ENST00000317552 ANP32AP39687 249 aaKnown RBP11.9□□□□□ -0.5
MID1-201ENST00000317552 ESF1Q9H501 851 aaKnown RBP11.89□□□□□ -0.51
MID1-201ENST00000317552 LOC105371045A0A1W2PR82 267 aa11.88□□□□□ -0.51
MID1-201ENST00000317552 BCL11AQ9H165 835 aa11.87□□□□□ -0.51
MID1-201ENST00000317552 FBLN2P98095 1184 aa11.85□□□□□ -0.51
MID1-201ENST00000317552 CCDC180Q9P1Z9 1646 aa11.83□□□□□ -0.51
MID1-201ENST00000317552 UPF2Q9HAU5 1272 aaKnown RBP11.82□□□□□ -0.52
MID1-201ENST00000317552 HSP90AA1P07900 732 aaKnown RBP11.82□□□□□ -0.52
MID1-201ENST00000317552 STAG3Q9UJ98 1225 aa11.78□□□□□ -0.52
MID1-201ENST00000317552 CDK11BP21127 795 aaKnown RBP11.77□□□□□ -0.53
MID1-201ENST00000317552 ABCC9O60706 1549 aa11.75□□□□□ -0.53
MID1-201ENST00000317552 GLIPR1L2Q4G1C9 344 aa11.74□□□□□ -0.53
MID1-201ENST00000317552 GTF3C3Q9Y5Q9 886 aa11.71□□□□□ -0.54
MID1-201ENST00000317552 NPM2Q86SE8 214 aaKnown RBP11.7□□□□□ -0.54
MID1-201ENST00000317552 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.69□□□□□ -0.54
MID1-201ENST00000317552 ZNF777Q9ULD5 760 aaPredicted RBP11.69□□□□□ -0.54
MID1-201ENST00000317552 NPM1P06748 294 aaKnown RBP eCLIP11.69□□□□□ -0.54
MID1-201ENST00000317552 CHGAP10645 457 aaKnown RBP11.66□□□□□ -0.54
MID1-201ENST00000317552 PABPN1Q86U42 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
MID1-201ENST00000317552 MYH16Q9H6N6 1097 aa11.62□□□□□ -0.55
MID1-201ENST00000317552 TONSLQ96HA7 1378 aa11.61□□□□□ -0.55
MID1-201ENST00000317552 EIF5BO60841 1220 aaKnown RBP11.61□□□□□ -0.55
MID1-201ENST00000317552 ARID3CA6NKF2 412 aa11.58□□□□□ -0.56
MID1-201ENST00000317552 WDR43Q15061 677 aaKnown RBP eCLIP11.58□□□□□ -0.56
MID1-201ENST00000317552 P3H3Q8IVL6 736 aa11.58□□□□□ -0.56
MID1-201ENST00000317552 NCLP19338 710 aaKnown RBP11.55□□□□□ -0.56
MID1-201ENST00000317552 PLPPR3Q6T4P5 718 aa11.54□□□□□ -0.56
MID1-201ENST00000317552 SCAF1Q9H7N4 1312 aaKnown RBP11.53□□□□□ -0.56
MID1-201ENST00000317552 ANP32EQ9BTT0 268 aa11.52□□□□□ -0.57
MID1-201ENST00000317552 TMC1Q8TDI8 760 aa11.51□□□□□ -0.57
MID1-201ENST00000317552 CSRNP3Q8WYN3 585 aa11.51□□□□□ -0.57
MID1-201ENST00000317552 ACIN1Q9UKV3 1341 aaKnown RBP11.51□□□□□ -0.57
MID1-201ENST00000317552 FKBP8Q14318 412 aa11.51□□□□□ -0.57
MID1-201ENST00000317552 HNRNPUQ00839 825 aaKnown RBP eCLIP11.5□□□□□ -0.57
MID1-201ENST00000317552 CCDC136Q96JN2 1154 aa11.5□□□□□ -0.57
MID1-201ENST00000317552 A0A0G2JS52 829 aa11.49□□□□□ -0.57
MID1-201ENST00000317552 FAM9BQ8IZU0 186 aa11.48□□□□□ -0.57
MID1-201ENST00000317552 BECN1Q14457 450 aa11.48□□□□□ -0.57
MID1-201ENST00000317552 GOLGA6L22H0YM25 854 aa11.47□□□□□ -0.57
MID1-201ENST00000317552 ZRSR1Q15695 479 aaKnown RBP11.47□□□□□ -0.57
MID1-201ENST00000317552 DDRGK1Q96HY6 314 aa11.47□□□□□ -0.57
MID1-201ENST00000317552 ZCCHC6Q5VYS8 1495 aaKnown RBP11.46□□□□□ -0.57
MID1-201ENST00000317552 TSPY4P0CV99 314 aa11.45□□□□□ -0.58
MID1-201ENST00000317552 TSPY10P0CW01 314 aa11.45□□□□□ -0.58
MID1-201ENST00000317552 CASC1Q6TDU7 716 aa11.44□□□□□ -0.58
MID1-201ENST00000317552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.44□□□□□ -0.58
MID1-201ENST00000317552 TRIM44Q96DX7 344 aaPredicted RBP11.42□□□□□ -0.58
MID1-201ENST00000317552 PPP1R15AO75807 674 aaPredicted RBP11.42□□□□□ -0.58
MID1-201ENST00000317552 TNNT2P45379 298 aaPredicted RBP11.41□□□□□ -0.58
MID1-201ENST00000317552 ZBTB7CA1YPR0 619 aa11.41□□□□□ -0.58
MID1-201ENST00000317552 SALL2Q9Y467 1007 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms