RNA–Protein interactions for RNA: ENST00000333447.11

PPFIA2-201, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5 BASIC

Gene PPFIA2, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-201ENST00000333447 MYT1Q01538 1121 aa14.82□□□□□ -0.04
PPFIA2-201ENST00000333447 PELP1Q8IZL8 1130 aaKnown RBP14.6□□□□□ -0.07
PPFIA2-201ENST00000333447 TTBK1Q5TCY1 1321 aaPredicted RBP13.81□□□□□ -0.2
PPFIA2-201ENST00000333447 ERICH6Q7L0X2 663 aa13.36□□□□□ -0.27
PPFIA2-201ENST00000333447 CENPBP07199 599 aaPredicted RBP13.15□□□□□ -0.3
PPFIA2-201ENST00000333447 CCER1Q8TC90 406 aaPredicted RBP13.05□□□□□ -0.32
PPFIA2-201ENST00000333447 ZEB1P37275 1124 aaPredicted RBP13.01□□□□□ -0.33
PPFIA2-201ENST00000333447 YTHDC1Q96MU7 727 aaKnown RBP12.87□□□□□ -0.35
PPFIA2-201ENST00000333447 HRCP23327 699 aa12.66□□□□□ -0.38
PPFIA2-201ENST00000333447 MYT1LQ9UL68 1186 aa12.48□□□□□ -0.41
PPFIA2-201ENST00000333447 GLIPR1L2Q4G1C9 344 aa12.43□□□□□ -0.42
PPFIA2-201ENST00000333447 NEFLP07196 543 aa12.4□□□□□ -0.42
PPFIA2-201ENST00000333447 PCGF6Q9BYE7 350 aa12.4□□□□□ -0.42
PPFIA2-201ENST00000333447 RANGAP1P46060 587 aaPredicted RBP12.31□□□□□ -0.44
PPFIA2-201ENST00000333447 CLSPNQ9HAW4 1339 aa12.28□□□□□ -0.44
PPFIA2-201ENST00000333447 RTL5Q5HYW3 569 aaPredicted RBP12.26□□□□□ -0.45
PPFIA2-201ENST00000333447 SLC24A1O60721 1099 aa12.25□□□□□ -0.45
PPFIA2-201ENST00000333447 ACIN1Q9UKV3 1341 aaKnown RBP12.1□□□□□ -0.47
PPFIA2-201ENST00000333447 TRIM26Q12899 539 aaPredicted RBP12.08□□□□□ -0.48
PPFIA2-201ENST00000333447 BCL11AQ9H165 835 aa12.08□□□□□ -0.48
PPFIA2-201ENST00000333447 GTF3C3Q9Y5Q9 886 aa12.07□□□□□ -0.48
PPFIA2-201ENST00000333447 DAXXQ9UER7 740 aaPredicted RBP12□□□□□ -0.49
PPFIA2-201ENST00000333447 ANP32EQ9BTT0 268 aa11.98□□□□□ -0.49
PPFIA2-201ENST00000333447 EIF5BO60841 1220 aaKnown RBP11.96□□□□□ -0.5
PPFIA2-201ENST00000333447 SUPT5HO00267 1087 aaKnown RBP11.94□□□□□ -0.5
PPFIA2-201ENST00000333447 DIEXFQ68CQ4 756 aaKnown RBP11.85□□□□□ -0.51
PPFIA2-201ENST00000333447 SCAF1Q9H7N4 1312 aaKnown RBP11.84□□□□□ -0.51
PPFIA2-201ENST00000333447 ZNF316A6NFI3 1004 aaPredicted RBP11.81□□□□□ -0.52
PPFIA2-201ENST00000333447 CDK11AQ9UQ88 783 aaPredicted RBP11.81□□□□□ -0.52
PPFIA2-201ENST00000333447 PPARGC1BQ86YN6 1023 aaKnown RBP11.8□□□□□ -0.52
PPFIA2-201ENST00000333447 APLP2Q06481 763 aa11.76□□□□□ -0.53
PPFIA2-201ENST00000333447 ERICH6BQ5W0A0 696 aa11.73□□□□□ -0.53
PPFIA2-201ENST00000333447 PRKCSHP14314 528 aaPredicted RBP11.73□□□□□ -0.53
PPFIA2-201ENST00000333447 FAM9AQ8IZU1 332 aaPredicted RBP11.72□□□□□ -0.53
PPFIA2-201ENST00000333447 NCLP19338 710 aaKnown RBP11.69□□□□□ -0.54
PPFIA2-201ENST00000333447 ANP32AP39687 249 aaKnown RBP11.66□□□□□ -0.54
PPFIA2-201ENST00000333447 TNNT2P45379 298 aaPredicted RBP11.63□□□□□ -0.55
PPFIA2-201ENST00000333447 ZNF326Q5BKZ1 582 aaKnown RBP11.56□□□□□ -0.56
PPFIA2-201ENST00000333447 NISCHQ9Y2I1 1504 aa11.56□□□□□ -0.56
PPFIA2-201ENST00000333447 NEUROD1Q13562 356 aa11.52□□□□□ -0.57
PPFIA2-201ENST00000333447 TRIM44Q96DX7 344 aaPredicted RBP11.52□□□□□ -0.57
PPFIA2-201ENST00000333447 DCAF8L2P0C7V8 631 aa11.52□□□□□ -0.57
PPFIA2-201ENST00000333447 EHMT2Q96KQ7 1210 aa11.5□□□□□ -0.57
PPFIA2-201ENST00000333447 ANP32BQ92688 251 aaKnown RBP11.46□□□□□ -0.57
PPFIA2-201ENST00000333447 DCAF1Q9Y4B6 1507 aa11.46□□□□□ -0.58
PPFIA2-201ENST00000333447 CDK11BP21127 795 aaKnown RBP11.43□□□□□ -0.58
PPFIA2-201ENST00000333447 POLR3GLQ9BT43 218 aa11.42□□□□□ -0.58
PPFIA2-201ENST00000333447 PODXL2Q9NZ53 605 aa11.42□□□□□ -0.58
PPFIA2-201ENST00000333447 ZBTB47Q9UFB7 747 aaPredicted RBP11.39□□□□□ -0.59
PPFIA2-201ENST00000333447 PKNOX2Q96KN3 472 aa11.38□□□□□ -0.59
PPFIA2-201ENST00000333447 BCANQ96GW7 911 aa11.37□□□□□ -0.59
PPFIA2-201ENST00000333447 RSPH6AQ9H0K4 717 aa11.36□□□□□ -0.59
PPFIA2-201ENST00000333447 DEKP35659 375 aaKnown RBP11.34□□□□□ -0.59
PPFIA2-201ENST00000333447 SHROOM4Q9ULL8 1493 aa11.33□□□□□ -0.59
PPFIA2-201ENST00000333447 PPM1GO15355 546 aaPredicted RBP11.33□□□□□ -0.6
PPFIA2-201ENST00000333447 DDRGK1Q96HY6 314 aa11.31□□□□□ -0.6
PPFIA2-201ENST00000333447 CCDC180Q9P1Z9 1646 aa11.31□□□□□ -0.6
PPFIA2-201ENST00000333447 CSRNP3Q8WYN3 585 aa11.3□□□□□ -0.6
PPFIA2-201ENST00000333447 NBR1Q14596 966 aa11.29□□□□□ -0.6
PPFIA2-201ENST00000333447 HSP90AA1P07900 732 aaKnown RBP11.28□□□□□ -0.6
PPFIA2-201ENST00000333447 PTMSP20962 102 aa11.28□□□□□ -0.6
PPFIA2-201ENST00000333447 FKBP8Q14318 412 aa11.26□□□□□ -0.61
PPFIA2-201ENST00000333447 NEFMP07197 916 aa11.26□□□□□ -0.61
PPFIA2-201ENST00000333447 TRIM41Q8WV44 630 aa11.25□□□□□ -0.61
PPFIA2-201ENST00000333447 NAP1L5Q96NT1 182 aaPredicted RBP11.24□□□□□ -0.61
PPFIA2-201ENST00000333447 ANP32CO43423 234 aa11.23□□□□□ -0.61
PPFIA2-201ENST00000333447 UBE2Q2Q8WVN8 375 aa11.23□□□□□ -0.61
PPFIA2-201ENST00000333447 NOP58Q9Y2X3 529 aaKnown RBP11.22□□□□□ -0.61
PPFIA2-201ENST00000333447 CNGB1Q14028 1251 aaPredicted RBP11.19□□□□□ -0.62
PPFIA2-201ENST00000333447 L1TD1Q5T7N2 865 aaKnown RBP11.18□□□□□ -0.62
PPFIA2-201ENST00000333447 CHIC1Q5VXU3 224 aa11.18□□□□□ -0.62
PPFIA2-201ENST00000333447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.17□□□□□ -0.62
PPFIA2-201ENST00000333447 HSP90AA2PQ14568 343 aaPredicted RBP11.13□□□□□ -0.63
PPFIA2-201ENST00000333447 VSIG10Q8N0Z9 540 aa11.12□□□□□ -0.63
PPFIA2-201ENST00000333447 SUPT16HQ9Y5B9 1047 aaKnown RBP11.12□□□□□ -0.63
PPFIA2-201ENST00000333447 ARID4BQ4LE39 1312 aaPredicted RBP11.11□□□□□ -0.63
PPFIA2-201ENST00000333447 RTN4Q9NQC3 1192 aaKnown RBP11.09□□□□□ -0.63
PPFIA2-201ENST00000333447 LAS1LQ9Y4W2 734 aaKnown RBP11.08□□□□□ -0.64
PPFIA2-201ENST00000333447 USP35Q9P2H5 1018 aa11.08□□□□□ -0.64
PPFIA2-201ENST00000333447 NPM2Q86SE8 214 aaKnown RBP11.07□□□□□ -0.64
PPFIA2-201ENST00000333447 UPF2Q9HAU5 1272 aaKnown RBP11.06□□□□□ -0.64
PPFIA2-201ENST00000333447 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.06□□□□□ -0.64
PPFIA2-201ENST00000333447 RBM19Q9Y4C8 960 aaKnown RBP11.05□□□□□ -0.64
PPFIA2-201ENST00000333447 TSHZ2Q9NRE2 1034 aa11.04□□□□□ -0.64
PPFIA2-201ENST00000333447 BECN1Q14457 450 aa11.03□□□□□ -0.64
PPFIA2-201ENST00000333447 CCDC136Q96JN2 1154 aa11.02□□□□□ -0.65
PPFIA2-201ENST00000333447 PNNQ9H307 717 aaKnown RBP11.01□□□□□ -0.65
PPFIA2-201ENST00000333447 PDE4CQ08493 712 aa11□□□□□ -0.65
PPFIA2-201ENST00000333447 FANCIQ9NVI1 1328 aa10.99□□□□□ -0.65
PPFIA2-201ENST00000333447 CALRP27797 417 aaKnown RBP10.99□□□□□ -0.65
PPFIA2-201ENST00000333447 MAP7D2Q96T17 732 aa10.95□□□□□ -0.66
PPFIA2-201ENST00000333447 PPP4R2Q9NY27 417 aa10.94□□□□□ -0.66
PPFIA2-201ENST00000333447 CANXP27824 592 aaKnown RBP10.94□□□□□ -0.66
PPFIA2-201ENST00000333447 TNNT3P45378 269 aaPredicted RBP10.94□□□□□ -0.66
PPFIA2-201ENST00000333447 MTERF4Q7Z6M4 381 aaKnown RBP10.94□□□□□ -0.66
PPFIA2-201ENST00000333447 UBTFP17480 764 aaKnown RBP10.93□□□□□ -0.66
PPFIA2-201ENST00000333447 HOMEZQ8IX15 550 aa10.93□□□□□ -0.66
PPFIA2-201ENST00000333447 A0A0U1RQG5 324 aaPredicted RBP10.93□□□□□ -0.66
PPFIA2-201ENST00000333447 LOC105371045A0A1W2PR82 267 aa10.92□□□□□ -0.66
PPFIA2-201ENST00000333447 ANO8Q9HCE9 1232 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms