Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 PHBP14-201ENST00000512887 367 ntBASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 SCARNA20.1-201ENST00000516009 138 ntBASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 EIF4BP1-201ENST00000554881 351 ntBASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 MIR744-201ENST00000578242 98 ntBASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 U6.81-201ENST00000612550 106 ntBASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 CR392039.5-201ENST00000623201 510 ntBASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 TTC38-207ENST00000629918 162 ntTSL 5 BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 AP005432.1-201ENST00000580891 3485 ntBASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 AP001029.2-203ENST00000589795 4910 ntBASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 ABCA4-201ENST00000370225 7309 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 OR5H1-202ENST00000641874 5999 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC3.76□□□□□ -1.81
KRTAP3-3Q9BYR6 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 RNA5SP78-201ENST00000364622 118 ntBASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 RNA5-8SP5-201ENST00000365304 152 ntBASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 RN7SKP220-201ENST00000410611 288 ntBASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 KRTAP3-4P-201ENST00000430780 280 ntBASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 PSMD10P3-201ENST00000437000 448 ntBASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 Z98747.1-201ENST00000438791 356 ntTSL 3 BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 MTND4LP1-201ENST00000446263 157 ntBASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 AC097510.1-201ENST00000510945 133 ntBASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 SCARNA21.1-201ENST00000515996 128 ntBASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 RNU7-179P-201ENST00000516608 68 ntBASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 AP005597.2-201ENST00000526238 341 ntBASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 AC048344.2-201ENST00000547280 147 ntBASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 AC138331.1-201ENST00000549993 376 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 PABPN1-208ENST00000557702 778 ntTSL 2 BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 RPL29P33-201ENST00000587474 316 ntBASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 SNORA28-201ENST00000606769 126 ntBASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 AC245033.3-201ENST00000617986 224 ntBASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 uc_338.10-201ENST00000621872 182 ntBASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 OR8B9P-202ENST00000642028 5216 ntBASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KRTAP3-3Q9BYR6 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 DIO2-202ENST00000438257 6136 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
KRTAP3-3Q9BYR6 TNNT3-202ENST00000344578 794 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms